1chambers that have controlled environments
INCUBATORS
2an insulated/enclosed device that provides an optimal condition of temperature, humidity, and other environmental conditions required for the growth of organisms
incubator
3in order for a microorganism to grow, we also need to provide an optimum temperature and appropriate atmosphere that mimics its environment
4Routine incubators in microbiology laboratories are usually set at
35°C ± 2°C, have 3% to 5% CO 2 , and are humidified
5commonly isolated bacteria are
mesophilic
6concentration of the CO 2 which is 3-5% is needed to maintain the pH of the culture media and environment inside the incubators
7environmental factors that influence the growth of bacteria
ph
temperature
aeration
8Essential for the growth of the bacteria
environmental factors
9Different incubation temperatures are used depending on what type of organism you are incubating
10temperature for fungi
28°C to 30°C
11temperature for Bacteria , viruses , and acid-fast bacillus
35°C to 37°C
12Fungi and bacteria have separate laboratories because their incubators are different.
13Campylobacter jejuni grows best at
42°C
14Listeria monocytogenes can grow at ; but grows best at
4°C to 43°C ; 20°C to 40°C
15Yersinia enterocolitica can grow at ; but grows best at
4°C to 43°C ; 20°C to 40°C
16L. monocytogenes and Y. enterocolitica require [ ] enrichment
cold
17grow best at low temperatures (15-20°C)
Psychrophiles
18grows best at 30°C - 37°C;
Commonly isolated bacteria
Mesophiles
19grows best at 50° - 60°C
Thermophiles
20grows best above 100°C
Hyperthermophiles
21psycrophiles are commonly found in
arctic seas
22thermophiles are usually found in
hot springs
23Most clinically significant bacteria are
strict anaerobes
facultative anaerobes
anaerobes
24requires oxygen for growth ; when oxygen is removed, microorganism dies
strict/obligate aerobe
25anaerobes but can still grow in the presence of oxygen
facultative aerobes
26grow only in absence of oxygen ; die once exposed to small concentrations of oxygen ; grows on bottom of tube
strict/obligate anaerobes
27aerobes but can still grow in absence of oxygen ; some grow on the subsurface until bottom of the tube
facultative anaerobes
28facultative anaerobes in aerobic conditions genrate energy by
fermentation
29process of utilization of carbohydrates without use of oxygen
fermentation
30requires oxygen to metabolize carbohydrates
oxidation
31exclusively anaerobic because they generate energy by fermentation
aerotolerant anaerobes
32not killed by oxygen because they live by fermentation with or without oxygen
aerotolerant anaerobe
33stricti fermenters ; not affected by oxygen ; growth is on the entire media
aerotolerant anaerobes
34optimum growth in low ocygen concentration
microaerophiles
35requires atmospheric condition enriched with carbon dioxide
capnophiles
36oxygen requirement of aerobes (%)
21%
37oxygen requierment of anaerobes (%)
0%
38oxygen requierment of microaerophiles (%)
5-10%
39oxygen requierment of capnophiles (%)
15%
40carbon dioxide requirement of aerobes (%)
0.03%
41carbon dioxide requirement of anaerobes (%)
5-10%
42carbon dioxide requirement of microaerophiles (%)
8-10%
43carbon dioxide requirement of capnophiles (%)
5-10%
44most common type of incubation performed in the laboratory
AEROBIC INCUBATION
45Uses aerobic incubator
AEROBIC INCUBATION
46Incubation has different processes for aerobic and anaerobic bacteria
47Most of the pathogenic bacteria are mesophilic and they require how many % of CO2
3-5%
48Specimens for culturing of anaerobes may be processed inside the biological safety cabinet
49tools in the laboratory that can provide an anaerobic environment for anaerobic and capnophilic incubation
Anaerobe Jars or Pouches ( GasPak System )
➔ GasPak Jar
➔ GasPak Pouch
Holding Jars
Anaerobic Chamber (Glove Box)
50reagent released: carbon dioxide, hydrogen
capnophiles (capnophilic)
51reagent released: carbon dioxide, hydrogen, nitrogen
anaerobes
52Inclusions of GasPak SYSTEM: GasPak JAR
envelope
palladium catalyst
indicator strip
inoculated plates
53in a GasPak SYSTEM: GasPak JAR, this generates CO2 and Hydrogen upon water
addition or by the moisture produced on the agar plates
envelope
54in a GasPak SYSTEM: GasPak JAR, this forms water by combining the Hydrogen and Oxygen inside the Jar and turn it into water
palladium catalyst
55in a GasPak SYSTEM: GasPak JAR, this is impregnated either with Methylene blue or resazurin to indicate anaerobiosis
indicator strip
56what is the indicator strip impregnated with in a GasPak SYSTEM: GasPak JAR
methelyne blue
resazurin
57color change of indicator strip in a GasPak SYSTEM: GasPak JAR impregnated with methylene blue if oxygen is present
blue
58color change of indicator strip in a GasPak SYSTEM: GasPak JAR impregnated with methylene blue if oxygen is absent
colorless
59color change of indicator strip in a GasPak SYSTEM: GasPak JAR impregnated with resazurin if oxygen is present
colorless
60color change of indicator strip in a GasPak SYSTEM: GasPak JAR impregnated with resazurin if oxygen is absent
pink
61Useful for laboratories processing small numbers of anaerobic specimens
GasPak SYSTEM: GasPak POUCH
62A pouch in a GasPak SYSTEM: GasPak POUCH can be used to incubate how many plates
1 or 2
63Anaerobic jars with loosely fitted lids attached by rubber tubing to nitrogen gas
HOLDING JARS
64It is used as a keeper of inoculated plates with pending incubation to minimize oxygen exposure
HOLDING JARS
65Made of molded or flexible clear plastic ; The latter is the most common type
ANAEROBIC CHAMBER (GLOVE BOX)
66Specimens and other materials are placed inside the chamber through an air lock
ANAEROBIC CHAMBER (GLOVE BOX)
67in anaerobic chamber (glove box) incubation, all work, from inoculation through workup, is performed inside a chamber by just inserting your hand in a gloves or sleeves that are attached in the chamber
68this type incubation uses a Candle Jar
MICROAEROPHILIC INCUBATION
69in microaerophilic incubation using a candle jar, the candle in the jar will burn and will consume [ ] inside reducing the [ ] level
oxygen
70Most cultures require how many days of incubation
2 days
71anaerobic cultures require longer incubation times
72Mycobacteria rapid growers incubation time
5-7 days
73Mycobacteria slow growers incubation time
after 7 days
74After incubation, inoculated agar plates will demonstrate colonies of bacteria on its surface.
75colony size >1mm
pinpoint
76colony size 1-5mm
moderate
77colony size 5-10mm
large
78used to describe the edge of the colony
margin
79determined by tilting the culture plate and looking at the side of the colony
elevation
80to see the differences in the density of colonies, it is useful to look through the colony while using
transillumination
81performed through transillumination by subjecting it to a light source
opacity
82based on appearance, similar to consistency ; by touching using an inoculating loop
texture
83what is the texture of the colony if the needle can pass through but colony will not stick
moist
84what is the texture of the colony if it sticks to the loop
viscid
85what is the texture of the colony if it is mucus like
mucoid
86colony odor: old sock
staphylococcus aureus
87colony odor: frutiyrapelike
pseudomonas aeruginosa
88colony odor: putrid
P. maribilis
89colony odor: mousy
Haemophilus spp.
90colony odor: fresh plowed field
Nocardia spp.
91colony odor: non fermenter with grapelike odor in cetrimide
Pseudomonas aeruginosa
92used to describe a particular genus in general
color
93determined by touching the colony with a sterile loop
consistency
94colony consistency: brittle
Nocardia spp.
95colony consistency: creamy (butyrous)
staphylococcus aureus
96colony consistency: dry
most Beta hemolytic streptococci
97an inherent characteristic of a specific organism confined generally to the colony, although some of these will diffuse through the culture medium
pigment
98colony pigment: green
all pseudomonas
99colony pigment: Brick Red
Seratia marcescens
100colony pigment: blue
Kluyvera spp.
101colony pigment: purple
chromobacterium violaceum
102colony pigment: brown black
prevotella melaninogenica
103what kind of hemolysis involves greenish discoloration that surrounds the colony
alpha hemolysis
104what kind of hemolysis involves clearing of the agar around the colony
beta hemolysis
105what kind of hemolysis wherein color around colony does not change ; no hemolysis
gamma hemolysis
106growth in agar slant: continuous threadlike growth with smooth edges
filiform
107growth in agar slant: continuous threadlike with irregular edges
echinulate
108growth in agar slant: blob or string of pearls ; droplet colonies
beaded
109growth in agar slant: thin spreading growth pattern
effuse
110growth in agar slant: tree like
arborescent
111growth in agar slant: root like
rhizoid
112how do you inoculate in a butt medium
stab
113how do you inoculate on a slant agar
only on the surface ; zigzag
114how do you inoculate on/in a butt slant medium
stab the butt ; zigzag pattern on surface of the slant
115forms are observed only if we do a line streak instead of a zigzag streak
116line streak growth: within line of streak
beaded
117line streak growth: fills whole medium
effuse
118line streak growth: thick branches
arborescent
119line streak growth: thin branches
rhizoid
120 growth on butt agar (liquefaction): saucer shaped at liquid surface
crateriform
121growth on butt agar (liquefaction): funnel shaped
infundibuliform
122growth on butt agar (liquefaction): tubular shaped, elongated
saccate
123growth on butt agar (liquefaction): complete liquefaction of upper half
stratiform
124used to determine if bacteria is a gas former
agar butt
125growth on butt agar (liquefaction): inverted flask shaped
napiform
126 growth on liquid mediaroth: thicker on the side
pellicle
127growth on liquid mediaroth: flaky appearance
flocculent
128growth on liquid mediaroth: granules present
granular
129growth on liquid mediaroth: found at the bottom of the tube, usually for storage of bacteria or controls
sediments
130in the GasPak method, within how many minutes will the lid over the catalyst become warm and visible mist or fog will appear on the inner wall
25 minutes