GATech BIOS 1208 Unit 1 - Biodiversity

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Phylogenetic Tree
A diagram showing the evolutionary relationships between different species
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Speciation
Formation of new species
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Taxa / Taxon
One or more groups of organisms that form an evolutionary unit
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Lineage
A taxon and all its ancestors
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Synapomorphy
A characteristic present in related species and their common ancestors
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Outgroup
The least related taxon in a tree
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Monophyletic Group / Clade
A common ancestor and all of its descendants
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Paraphyletic Group
A monophyletic group which one or more descendants are excluded
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Polyphyletic Group
A monophyletic group which lacks the common ancestor
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Evograms
Phylogenetic trees with a timescale
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Hadean Eon
The earliest eon, before compelling evidence of life (4.6 BYA - 4.0 BYA)
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Archaean Eon
The eon which contains the evolution of early life (4.0 BYA - 2.5 BYA)
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Proterozoic Eon
The eon which contains oxygen accumulation and the flourishing of early microbial life (2.5 BYA - 542 MYA)
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Phanerozoic Eon
Rapid increase in animal and plant life (542 MYA - Now)
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Prokaryotes
The first living organisms, containing bacteria and archaea
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Peptidoglycan
Bacterial cell walls are made of this
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Polysaccharides
Archaean cell walls are made of this
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Binary Fission
A method of asexual reproduction used by prokaryotes
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Horizontal Gene Transfer
The transfer of information through plasmids, a process that makes classifying the relatedness of prokaryotes difficult
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Phototrophs
Organisms that obtain their energy from light
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Chemotrophs
Organisms that obtain their energy from chemical compounds
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Autotrophs
Organisms that obtain carbon from inorganic sources
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Heterotrophs
Organisms that obtain carbon from other organisms
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The Oxygen Revolution
The time span where cyanobacteria produced free oxygen that reacted with iron to precipitate out of the ocean
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Endosymbiotic Theory
The theory that states an Archaean cell absorbs an aerobic bacterial cell that eventually resulted in the mitochondria
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Archaean Eon (2.5 BYA)
The first cyanobacteria arose in this eon
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Proterozoic Eon (1.6 BYA)
The first single-celled eukaryotes arose in this eon
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Proterozoic Eon (1.4 BYA)
The first multicellular algae arose in this eon
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Proterozoic Eon (635 MYA)
The first multicellular animals arose in this eon
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Phanerozoic Eon (542 MYA)
The Cambrian explosion occurred at the start of this eon
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Archaeplastidia
Two engulfment events resulted in chloroplasts, this is the lineage that included green plants
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Paulinella
Two engulfment events resulted in chloroplasts, this is the lineage that included amoebas
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Unique Traits of Eukaryotes
Cells with Nuclei, Mitochondria, A Cytoskeleton, Linear Chromosomes, Mitosis, Meiosis
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Ploidy
Number of copies of each chromosome
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Haploid
1n Ploidy
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Diploid
2n Ploidy
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Fertilization
The joining of male and female gametes
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Haplontic Life Cycle
The observed organism is haploid, the zygote immediately undergoes meiosis and produces spores
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Diplontic Life Cycle
The observed organism is diploid, the zygote undergoes mitosis and spores are never produced
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Haplodiplontic Life Cycle (Alternation of Generations)
Organisms with this life cycle have both a haploid and diploid multicellular state
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Sporophytes
The diploid multicellular state in alternation of generations
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Gametophytes
The haploid multicellular state in alternation of generations
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Protists
Any eukaryote that does not fall into the category of plant, animal, or fungus
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Benefits to Living in Water for Plants
Can't dry out, external support structure, sperm and egg can swim to each other, water filters out UV light
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Benefits to Living on Land for Plants
Sunlight is more abundant, carbon dioxide is more abundant, early lack of predators
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Waxy Cuticle
Prevents plants from drying out through evaporation
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Stomata
Pores on a plant that allow for the exchange of gases
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Roots
Anchors plants and allows for water absorption
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Mycorrhizal Fungi
Fungi that surround plant roots to help them obtain water and minerals
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Rhizoids
A thin, rootlike structure that anchors plants and absorbs water and nutrients
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Bryophytes
Nonvascular plants like mosses, liverworts, and hornworts that are physically tied to water and have a gametophyte-dominated life
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Lycophytes
Seedless vascular plants like ferns and horsetails that still require water for reproduction and the sporophyte is larger than the free living gametophyte
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Xylem
Vascular tissue that carries water upward from the roots to every part of a plant
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Phloem
Vascular tissue that moves sugars throughout a plant
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Lignin
Substance in plants that makes their cell walls rigid
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Gymnosperms
Seeded, nonflowering plants like trees that use pollen and seeds to produce and protect sperm and eggs respectively and also have attached gametophytes
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Angiosperms
Flowering plants that allow for pollinators to move pollen, have double fertilization, have fruits, and attached gametophytes
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Endosperm
A nutrient-rich tissue that grows alongside a sperm cell in some plants
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Cambrian, Ordovician, Silurian, Devonian, Carboniferous, Permian, Triassic, Jurassic, Cretaceous, Paleogene, Neogene, Quaternary
Name the Phanerozoic Eon's periods

(Camels Often Sit Down Carefully; Perhaps Their Joints Creak? Please Need Quick!)
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Paleozoic, Mesozoic, Cenozoic
Name the Phanerozoic Eon's Eras
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Bryophytes (Alternation of Generations)
In Alternation of Generations, when the haploid gametophyte is larger than the sporophyte
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Seedless Vascular Plants
In Alternation of Generations, when the sporophyte is larger than the gametophyte, which is free-living
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Chitin
The substance that makes up fungal cell walls
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Osmotrophy
The external digestion of food, used by fungi
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Mycelium
The body of a multicellular fungus
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Hyphae
The branching, threadlike tubes that make up the bodies of multicellular fungi
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Fruiting Bodies
Fungi produce spores in reproductive structures called
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Exoenzymes
Enzymes which digest organic matter for fungi
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Plasmogamy
Fusion of two haploid cells with independent nuclei
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Karyogamy
The fusion of nuclei to form a diploid nucleus
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Saprophytic Fungi
Fungi that get their energy from decaying organic matter
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True Tissues
A group of similar cells that exist in all plants except for sponges
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Eumetazoans
Animals that have true tissues
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Cnidaria
The phylum that likely includes the first eumetazoan
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Cephilization
The concentration of nerves in a single area
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Diploblast
An animal that develops from two embryonic germ layers
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Triploblast
An animal that develops from three germ layers
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Ectoderm
The outermost germ layer
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Endoderm
The innermost germ layer
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Coelom
A fluid filled body cavity
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Mesodermal Tissue
The middle germ layer in a triploblast
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Nematoda
Ancestors of roundworms, the first to develop a complete digestive system
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Flatworms (Platyhelminthes)
Species and lineage that lost the coelom and the complete digestive system, they also have two nerve cords
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Tracheae
Tiny tubes in insect body that deliver oxygen directly to metabolizing tissues
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Ventral Nerve Cord
Belly-side nerve cord
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Dorsal Nerve Cord
Back-side nerve cord
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Porifera
Sponges that lack true tissue and symmetry
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Acoelomorpha
Flatworms, but not true flatworms
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Protostomes
Group of organisms with cephalization, mouth-first digestive tract, organ systems
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Arthropoda
The phylum of insects
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Deuterostomes
The anus develops first in the digestive tract
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Chordata
All animals with a notochord, dorsal hollow nerve chord, pharyngeal slits, and a muscular post-anal tail
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Notochord
A flexible rod that supports a chordate's back
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Dorsal Hollow Nerve Cord
Nerve cord found in all chordates that forms the spinal cord and brain
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Pharyngeal Slits
Slits that allow for the filtering of water and food
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Pharynx
The space behind your mouth, your throat
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Muscular Post-Anal Tail
Structure that allows for locomotion in water and balance
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Craniata
Chordates with a cranium
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Myxini (Hagfish)
Only living species with a skull but no vertebral column or jaw
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Vertebrata
Chordates that have a vertebral column
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Agnathostomes
Jawless fish species without jaw
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Hyperaortia (Lampreys)
Living agnathostomes
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Gnathostomes
Vertebrates that have a jaw
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Placoderms
Early example of gnathostomes
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Chondrichthyes
Fish that have a skeleton of cartilage
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Osteichthyes
Fish with bony skeletons and lungs
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Sarcopterygii
Lobe-finned fishes
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Tetrapods
four-limbed vertebrates
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Tiktaalik
An intermediate species between lobe fins and limbs
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Amphibia
frogs, toads, and salamanders that live in both aquatic and land stages in life
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Amniota
Reptiles, birds, and mammals that are able to reproduce on land due to a specialized egg
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Sauropsids
Ancestors of reptiles, birds, dinosaurs, snakes, and lizards
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Reptilia
Class of animals with scaly skin made of keratin
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Anapsid
Solid skull with no holes behind eyes
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Diapsids
Skull with two holes on each side of the head
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Ectotherms
An animals that warms itself mainly by absorbing heat from its surroundings
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Aves
Class of birds
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Endotherms
Warm blooded animals
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Synapsids
Ancestors of mammals, single hole behind each eye in skull
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Mammalia
Class of mammals
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Eutherians
Placental mammals
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Marsupials
Mammals that carry their young in a pouch
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Monotremes
Mammals that lay eggs
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Rodinia
Precambrian supercontinent
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Pangea
Most recent supercontinent
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end-Ordovician
The first mass extinction, second largest, likely caused by glaciation and global warming
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end-Devonian
The second mass extinction, primarily affected marine species, causes are unknown
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end-Permian
The third and largest mass extinction, likely caused by extended volcanic activity
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end-Triassic
The fourth mass extinction, causes are unclear
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end-Cretaceous
The fifth mass extinction, a meteor impact that wiped out the dinosaurs
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Milankovitch Cycles
The effect of slight changes in Earth's orbit on the climate
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The Medieval Climate Anomaly
A period of time where the climate was 0.1 - 0.2 C higher than normal
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The Little Ice Age
A period of time where the climate cooled 1 C compared to normal
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