1Carl Woese Domains
3 Domains, Bacteria, Archae, and Eukarya
2Eocyte Hypothesis
2 domains, bacteria and Archae
archae is a much larger domain, with Eukaryotes being an offshoot.
3Prokaryotes
Archae and Bacteria
no nucleus or organelles
Nucleoid region of DNA (coiled tightly)
70S Ribosomes (30S+50S0
Haploid (DNA from single cell that splits)
4Bacteriaphage/phage
These are viruses that infect/EAT bacteria for replication
5phage definition (latin)
to eat
6Eukaryotic cell
80S ribosomes (40S+60S)
Diploid (two DNA sets)
NO peptidoglycan
7Unique to bacteria
peptidoglycan
8Nucleoid region
NOT membrane enclosed
single, large circular dsDNA that is supercoiled
9What are inclusion bodies?
Storage granules, contain:
metabolites, fats, sugars, and ions
10main difference between inclusion bodies and storage granules?
inclusion bodies will contain metals and ions
11Prokaryote cell membrane vs our cell membrane?
PROK: lack sterols, can be used for ETC&energy production BACTERIA will have peptidoglycan
EUK: contain sterols
12Gram positive vs gram negative
positive has thick outer shell of peptidoglycan
negative has thin layer of peptidoglycan underneath a second, outermembrane.
13Peptidoglycan bond names
NAG and NAM
Beta 1,4 glycosidic bond (NAG and NAM)
pentaglycine cross link between NAM's
14NAG
N-acetylglucosamine (protein sugars)
15NAM
N-acetylmuramic acid (protein sugars)
16Which enzyme catalyzed beta 1,4 glycosidic linkage between NAG and NAM?
transglycosylase
17NAM self link name?
Pentaglycine cross link
catalyzed by transpeptidase
18Bactoprenol
membrane carrier that transports monomers (NAG and NAM) from cytosol to external site (for peptidoglycan building)
19Transpeptidase
connects the NAM's together as pentaglycine link
20Gramp positive cell wall attributes
Techoic acids and/or Lipoteichoic acids
(TA) (LTA)
for rigidity and infectious attributes (anchors)
21Gram negative cell wall charactersitics
periplasmic space (between the membranes)
Lipopolysaccharide (LPS) layer
NONE techoic acids
22what is the point of the periplasmic space?
produce enzymes to resist antibiotics in gram negative bacteria
*Beta Lactamase cleaves Beta lactam ring
23Lipopolysaccharide layer
O antigen (antigenic)
Core Polysaccharide
Lipid A (ENDOTOXIN)
24endotoxin refers to
usually refers to entire LPS structure, but lipid A is main antagonist for gram negative bacteria
25what do endotoxins do?
cells regocnize them via LPS receptors
start immune response and can induce fever or shock.
26Cytokines
produced my macrophage to trigger immune response
communication across cells
27Lysozyme effects
hydrolyzes Beta 1,4 glycosydic bond between NAG and NAM
acts as antibacterial in saliva
28Penecillin effects
Transpeptidase inhibition with Beta lactam ring
29protoplast
entire removal of cell wall
penecillin with gram positive bacteria
30spheroblast
partial removal of cell wall
penecillin with gram negative bacteria
31Glycocalyx
Slime layer
allows adhesion for biofilm formations
32Gram stain steps
fix
crystal violet
iodine
decolor with alcohol
coutnerstain
crystal violet stays in due to heavy peptidoglycan layer of gram positive cells
33Cell capsule
gelatinous layer outside of the cell wall, it can "hide" peptidogycan or LPS to avoid phagocytosis
BOTH gram POSTIVE and NEGATIVE
polysaccharide
Virulence factor; increases infectivity
Some capsules are ANTIGENIC
34pathogenicity
ability to cause disease
35virulence factors
attributes that increase disease severity or ability to infect
36Quellung reaction
antibody mediated, causes swelling of capsules by identifying proteins in capsules
37flagella
motility, chemotaxis
H7 indiactor in NAME. H means FLAGELLA
monotrichous
lophotrichous
Amphitrichous
Peritrichous
38Flagellar Anchors
Gram positive have 2 rings, P and M (peptidoglycan and membrane)
Gram negative has 4 rings
L ring (LPS)
P ring (periplasm)
S ring (surface cytoplasmic membrane)
C ring (cytoplasm)
39Fimbrae
attachment (many of them)
40Pili
Sense environment
attachment
horizontal gene transfer
41size order of pili, flagella, and fimbrae
Flagella>Pili>fimbrae
42Type I pili
Fim A or H, rod or adhesion proteins
43Type II pili
sex or fertility (F-Pili)
transfer plasmids and DNA via conjugation
44Type III Pili
injectosome, secretion channel to deliver Proteins
45Type IV Pili
twitching and jerking
46Type V Pili
Oral Pathogen and biofilm formation
47cocci
circular, sphere abcteria
51staphylo
grape-like, paired in bunches