Principles of Cell + Membrane Function

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1
 
Site for metabolism (biochemistry)( and protein
synthesis. It has " " (i.e. glycogen storgae vessels)
Cytosol
Site for metabolism (biochemistry)( and protein
synthesis. It has "inclusion bodies" (i.e. glycogen storgae vessels)
2
 
House the genetic information in the form of DNA
carrying instructions for bodily functions (22
autosomes, 2 sex chromosomes), RNA synthesis
Nuclease
House the genetic information in the form of DNA
carrying instructions for bodily functions (22
autosomes, 2 sex chromosomes), RNA synthesis
3
 
ATP synthesis and calcium storage
Mitochondria
ATP synthesis and calcium storage
4
 
ER Lipid synthesis
Smooth
ER Lipid synthesis
5
 
Translation of mRNA
Rough ER
Translation of mRNA
6
 
Translation of mRNA
Free ribosomes
Translation of mRNA
7
 
Intracellular degradation
Lysosome
Intracellular degradation
8
 
Sorting, packaging of proteins and lipids for delivery
Golgi apparatus
Sorting, packaging of proteins and lipids for delivery
9
 
Cellular uptake
Endosome
Cellular uptake
10
 
Degradation of intracellular proteins
Proteosome
Degradation of intracellular proteins
11
 
Detoxification of substances
Peroxisome
Detoxification of substances
12
Plasma membrane
Creates  gradient, cell communication via   +  
Plasma membrane
Creates electrical chemical gradient, cell communication via neurotransmitters + hormones
13
****TEST QUESTION
 : network of protein fibers that
supports the cell structure and functions
(organelle movement, cell division and trafficking)
****TEST QUESTION
Cytoskeleton: network of protein fibers that
supports the cell structure and functions
(organelle movement, cell division and trafficking)
14
What are the 3 cytoskeleton components?
 ,  , 
What are the 3 cytoskeleton components?
Microfilaments, intermediate filaments, microtubules
15
What intermediate is in epithelium?
Desmin
16
What intermediate is found in Connective tissue (fibroblasts,
endothelial cells, chondroblasts and
mesenchymal cells)?
Vimentin
17
What intermediate is found in Neuroglial (glial cells, astrocytes,
Schoeman cells and oligodendrocytes)?
Glial fibillary acidic protein (GFAP)
18
In what cell type are neurons found (axons, dendrites, and neuronal appendages)?
Neurofilaments
19
Diameter of microfilaments? Protein subunit?
7 nm, Actin
20
Diameter of intermediate filament? Protein subunit?
10, several proteins
21
Diameter of microtubule? Protein subunit?
25 nm, Tubulin
22
TQ The nucleus houses the instructional information for homeostatic process in the form of  
TQ The nucleus houses the instructional information for homeostatic process in the form of DNA
23
TQ The nucleus site of gene regulation,   and  , where all machinery
reside
TQ The nucleus site of gene regulation, DNA replication and transcription, where all machinery
reside
24
TQ The nucleus is encapsulated by a   (  membrane)
TQ The nucleus is encapsulated by a nuclear envelop (double layered membrane)
25
TQ The nucleus outer layer of nuclear envelop is continuous with  
and contains 
TQ The nucleus outer layer of nuclear envelop is continuous with rough endoplasmic reticulum
and contains nuclear pores
26
TQ The nuclear pores are associated with  , which allow the
passage of substance between nucleus and cytoplasm
TQ The nuclear pores are associated with nuclear pore complex, which allow the
passage of substance between nucleus and cytoplasm
27
TQ Only proteins with   are allowed in the nucleus
TQ Only proteins with Nuclear localization signal (NLS) are allowed in the nucleus
28
TQ Only proteins with   are allowed to exit the nucleus
TQ Only proteins with nuclear export sequence (NES) are allowed to exit the nucleus
29
TQ The inner membrane is supported by  .
Intermediate filament types  
TQ The inner membrane is supported by nuclear filaments (nuclear lamina).
Intermediate filament types A, B and C
30
TQ DNA complexed with histones is called  . Malignant cells contain more  
TQ DNA complexed with histones is called chromatin. Malignant cells contain more euchromatin
31
TQ Inclusion bodies called   synthesize cells rRNA
TQ Inclusion bodies called nucleolus synthesize cells rRNA
32
TQ
RER plays a role in   (contains  )
TQ
RER plays a role in protein
synthesis
(contains ribosomes)
33
TQ Smooth ER is responsible for
 ,  
and  ,   for muscle contraction
and  
TQ Smooth ER is responsible for
steroidogenesis, fatty acid synthesis
and phospholipids, recycling
calcium ions
for muscle contraction
and detoxification
34
 
Site for metabolism (biochemistry)( and protein
synthesis. It has " " (i.e. glycogen storgae vessels)
Cytosol
Site for metabolism (biochemistry)( and protein
synthesis. It has "inclusion bodies" (i.e. glycogen storgae vessels)
35
  pathwya: Secretion is continuous and unregulated
Constitiutive pathwya: Secretion is continuous and unregulated
36
 : Secretion is directed by hormonal or neural signal
Regulated pathway: Secretion is directed by hormonal or neural signal
37
Golgi apparatus is divided into
receiving end of packaged
protein from RER ( -Golgi),
modifying Golgi where protein
modifications occur (Golgi stack)
and exporting Golgi, where
modified proteins are packaged
and sent to their destination
( -Golgi)
Golgi apparatus is divided into
receiving end of packaged
protein from RER (cis-Golgi),
modifying Golgi where protein
modifications occur (Golgi stack)
and exporting Golgi, where
modified proteins are packaged
and sent to their destination
(trans-Golgi)
38
Proteins need a tag (localization signal)to reach their destination (i.e.
 is the tag associated with proteins destined for the
lysosome)
Proteins need a tag (localization signal)to reach their destination (i.e.
mannose-6-phohpate is the tag associated with proteins destined for the
lysosome)
39
Proteins without a tag become  
Proteins without a tag become secretory proteins
40
A   (mannose-6-phosphate) targets new hydrolytic
enzymes to lysosomes- defects in the process leads to fatal childhood
lysosomal storage disease
A recognition marker (mannose-6-phosphate) targets new hydrolytic
enzymes to lysosomes- defects in the process leads to fatal childhood
lysosomal storage disease
41
Lysosomes are made in the   as coated vesicles
Lysosomes are made in the Golgi complex as coated vesicles
42
  Disease a lysosomal enzyme is missing and causing cells to
accumulate compounds ( ). Accumulated material within neurons
interferes with function. It is a   disease.
Tay-Sach's Disease a lysosomal enzyme is missing and causing cells to
accumulate compounds (gangliosides). Accumulated material within neurons
interferes with function. It is a lysosomal storage disease.
43
TQ Mitochondria have their own   and have a   membrane
TQ Mitochondria have their own DNA and have a double-layer membrane
44
TQ  affect important systems in the body, nervous and muscles.
TQ Mitochondrial diseases affect important systems in the body, nervous and muscles.
45
TQ
The outer membrane transports   into the mitochondria
The inner membrane forms  , called a  , allow a   for reactions
TQ
The outer membrane transports large proteins into the mitochondria
The inner membrane forms invaginations (folds), called a cristae, allow a large
surface area
for reactions
46
TQ Mitochondria is the primary site of   (contains many enzymes for B-oxidation of fatty acid,  production,  cycle and oxidative
phosphorylation ) and has the proteins of the  
TQ Mitochondria is the primary site of ATP synthesis (contains many enzymes for B-oxidation of fatty acid, acetyl-CoA production, tricarboxylic acid (TCA) cycle and oxidative
phosphorylation ) and has the proteins of the ETC
47
TQ Cells requiring a lot of energy will have a lot of mitochondria per cell, most affected
in mitochondrial diseases. Development of   or   disease have been associated with higher mtDNA mutation rate
TQ Cells requiring a lot of energy will have a lot of mitochondria per cell, most affected
in mitochondrial diseases. Development of Parkinson or Alzheimer disease have been associated with higher mtDNA mutation rate
48
Plasma membrane lipid composition varies by cell type,
fluidity is determined by  and
 - important!
Plasma membrane lipid composition varies by cell type,
fluidity is determined by lipid composition and
temperature- important!
49
What are the 3 membrane proteins?
1. Phospholipids
2. Cholesterol
3. Glycolipids
50
What are the three types of membrane proteins?
1. Lipid-anchored
2. Integral
3. Peripheral membrane
51
TQ
Phospholipids are the major lipid of plamsa membrane. Hydrophillic head of  , hydrophobic  .
TQ
Phospholipids are the major lipid of plamsa membrane. Hydrophillic head of phosphate group, hydrophobic acyl tail.
52
Phospholipids create   create  
Phospholipids create micelles create phospholipid bilayers
53
The  fatty acid in the phospholipid creates a “kink” in the chain,
which prevents tight packing –important for membrane fluidity
The unsaturated fatty acid in the phospholipid creates a “kink” in the chain,
which prevents tight packing –important for membrane fluidity
54
What are the two phospholipids on the outer leaflet?
1. Phosphatidyl choline
2. Sphingomyelin
55
What are the 3 phospholipids on the inner leaflet?
1. Phospatidylethanolamine
2. Phosphatidyl serine
3. Phosphatidylinositol
56
3 classes of sphingolipids are ,  , and  
3 classes of sphingolipids are sphingomyelins, glycosphingolipids, and gangliosides
57
TQ
Cholesterol is found in both leaflets and provides   to the lipid bilayer at normal body temp.
TQ
Cholesterol is found in both leaflets and provides stability to the lipid bilayer at normal body temp.
58
TQ
  of the lipids in the membrane can be cholesterol
TQ
50% of the lipids in the membrane can be cholesterol
59
Cholesterol aids in stifferning the membrane and can flip easily.   can move laterally, rotate, or flex. They rarely do  .
Cholesterol aids in stifferning the membrane and can flip easily. Phospholipids can move laterally, rotate, or flex. They rarely do flip.
60
Glycolipids
-  component
-  group is a
carbohydrate
Glycolipids
-Minor component
-Polar head group is a
carbohydrate
61
Glycolipids
-  are two fatty
acyl chain
-Important in cel-cell
interactions
Glycolipids
-Hydrophobic are two fatty
acyl chain
-Important in cel-cell
interactions
62
Glycolipids
-  type
-Pathogen recognition
-  formation
Glycolipids
-ABO blood type
-Pathogen recognition
-Glycocalyx formation
63
Fluid Mosaic Model
A fluid like
 
bilayer where lipids
and proteins are
embedded
Fluid Mosaic Model
A fluid like
phospholipid
bilayer where lipids
and proteins are
embedded
64
TEST QUESTION
Large uncharged  
molecules need
transporters
TEST QUESTION
Large uncharged polar
molecules need
transporters
65
TQ
Ions need  
TQ
Ions need channels
66
-Only  
molecules diffuse
through the PM
- To a lesser extent
  polar
molecules
-Only hydrophilic
molecules diffuse
through the PM
- To a lesser extent
small uncharged polar
molecules
67
3 examples of hydrophobic molecules that diffuse through the membrane
O2, CO2, N2
68
Homeostasis is achieved when
 =  
Homeostasis is achieved when
Input = Output
69
How does a sodium/potassum work?
Maintains a gradiant where 2K+ come in and 3+ Na+ leave
70
Bilayer has TM proteins that are
active pumps to maintain
concentration gradients; e.g.  
Bilayer has TM proteins that are
active pumps to maintain
concentration gradients; e.g. Na-K
pump
71
Concentration gradient is  
Concentration gradient is potential
energy
72
NO ATP = NO  , you lose the
concentration gradient-cell dies
NO ATP = NO pump, you lose the
concentration gradient-cell dies
73
Proteins that are either  
into the bilayer or 
to the bilayer
Proteins that are either integrated
into the bilayer or covalently bound
to the bilayer
74
The integrated proteins are
imbedded in the bilayer,
  amino acids are
associated with the hydrophobic
 
The integrated proteins are
imbedded in the bilayer,
hydrophobic amino acids are
associated with the hydrophobic
fatty acyl chairs
75
The non embedded integral
membrane proteins are anchored to
a   or   by a  
The non embedded integral
membrane proteins are anchored to
a lipid or GPI by a covalent bond
76
TEST QUESTION
2 examples of GPCR
Adrenergic receptors, muscarinic
receptors
77
TEST QUESTION
Example of ligand binding receptor
Insulin receptor
78
TEST QUESTION
Example Transport proteins i.e. pump, carrier,
pores and ion channels
Na+/K+ ATPase pump
79
TEST QUESTION
Example of Enzymes
GPI linked proteins: Carbonic
anhydrase
80
TEST QUESTION
2 example of adhesion molecules
Integrins, cadherins
81
  are important in important in excitable
cells (neurons and
muscle cells)
Ion channels are important in important in excitable
cells (neurons and
muscle cells)
82
Ion channels are classifed by their
 ,  
and mechanism of  
Ion channels are classifed by their
selectivity, conductance
and mechanism of gating
83
Majority of Ion channels
are  
Majority of Ion channels
are selective
84
Conductance is the property of the channel, how many ions are allowed through,
can vary based on   ( vs.  )
Conductance is the property of the channel, how many ions are allowed through,
can vary based on ionic movement (inward rectifier vs. outward rectifier)
85
 channel, important in coupling
electrical signal to calcium release: neuronal excitability, muscle
contraction, etc. (high conductance and selective for potassium)
Calcium activated potassium channel, important in coupling
electrical signal to calcium release: neuronal excitability, muscle
contraction, etc. (high conductance and selective for potassium)
86
TEST QUESTION
The gate can be a  
(neurotransmitter/ or an
intercellular messenger),
  (such as
pressure or stretch),
  (membrane
potential)
TEST QUESTION
The gate can be a ligand
(neurotransmitter/ or an
intercellular messenger),
mechanical (such as
pressure or stretch),
voltage (membrane
potential)
87
In the cases when there is
no gate, the ion channel is
always in an  
In the cases when there is
no gate, the ion channel is
always in an open state
88
Different types in different cells, the potassium channel all responsd to   effect
in the cell- ligand gated ( ,  ,  )
Different types in different cells, the potassium channel all responsd to cAMP effect
in the cell- ligand gated (cardiac, neuron, smooth muscle)
89
Stretch gated ions are sensed by the   i.e., stretch are translated into
  or  signals
Stretch gated ions are sensed by the plasma membrane i.e., stretch are translated into
chemical or electrical signals
90
Cell-matrix adhesion molecules: Integrins, allow
communication between a cell & its surrounding tissue
(adaptation). Critical for cell  ,  
cellular   & 
Cell-matrix adhesion molecules: Integrins, allow
communication between a cell & its surrounding tissue
(adaptation). Critical for cell development, growth,
cellular shape & mobility
91
What are two examples of cell-to-cell communication?
1. Cadherins
2. N-CAMs
92
Cadherins:   cell adhesion
molecules; e.g.,  
Cadherins: Ca2+ dependent cell adhesion
molecules; e.g., glycoprotein
93
N-CAMs:  neural cell adhesion
molecules are part of the immunoglobulin family
& function in the migration of  s &
development of 
N-CAMs: Ca2+ independent neural cell adhesion
molecules are part of the immunoglobulin family
& function in the migration of immune cells &
development of axons
94
GPI-linked class: function is  
GPI-linked class: function is unclear
95
Loss of cell adhesion molecules is observed in  tumors
Loss of cell adhesion molecules is observed in metastatic tumors
96
Peripheral membrane proteions are  in the membrane
and  bound. They are loosely attached to the
membrane on either side by
 
Peripheral membrane proteions are not embedded in the membrane
and not covalently bound. They are loosely attached to the
membrane on either side by
ionic interactions
97
 is a classical
example, anchors the
cytoskeleton of red blood
cells to an integral meme
bane protein
Ankyrin is a classical
example, anchors the
cytoskeleton of red blood
cells to an integral meme
bane protein
98
Ankyrin is loosely bound to the plasma
membrane by the integral membrane protein
( ) and holds or “anchors”  
network to Band 3
Ankyrin is loosely bound to the plasma
membrane by the integral membrane protein
(Band 3) and holds or “anchors” sceptrin-actin
network to Band 3
99
Plasma membrane receptors include
1. Ligand gated ion ( )
2. Receptor kinases ( )
3. G protein coupled receptoprs ( ,  , and  )
Plasma membrane receptors include
1. Ligand gated ion (nitoconic receptor)
2. Receptor kinases (tyrosine kinases)
3. G protein coupled receptoprs (GPCRs, muscarinic, and adrenrgic)
100
Intracellular receotors include transcription factors ( )
Intracellular receotors include transcription factors (glucocorticoid receptors)
101
  = targets same cell
  = ajacent cell
 = Bloodstream
Autocrine = targets same cell
Paracrine = ajacent cell
Endocrone = Bloodstream
102
Homeostasis is achieved when
 =  
Homeostasis is achieved when
Input = Output
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