1
Site for metabolism (biochemistry)( and protein
synthesis. It has " " (i.e. glycogen storgae vessels)
Cytosol
Site for metabolism (biochemistry)( and protein
synthesis. It has "inclusion bodies" (i.e. glycogen storgae vessels)
2
House the genetic information in the form of DNA
carrying instructions for bodily functions (22
autosomes, 2 sex chromosomes), RNA synthesis
Nuclease
House the genetic information in the form of DNA
carrying instructions for bodily functions (22
autosomes, 2 sex chromosomes), RNA synthesis
3
ATP synthesis and calcium storage
Mitochondria
ATP synthesis and calcium storage
4
ER Lipid synthesis
Smooth
ER Lipid synthesis
5
Translation of mRNA
Rough ER
Translation of mRNA
6
Translation of mRNA
Free ribosomes
Translation of mRNA
7
Intracellular degradation
Lysosome
Intracellular degradation
8
Sorting, packaging of proteins and lipids for delivery
Golgi apparatus
Sorting, packaging of proteins and lipids for delivery
9
Cellular uptake
Endosome
Cellular uptake
10
Degradation of intracellular proteins
Proteosome
Degradation of intracellular proteins
11
Detoxification of substances
Peroxisome
Detoxification of substances
12Plasma membrane
Creates gradient, cell communication via +
Plasma membrane
Creates electrical chemical gradient, cell communication via neurotransmitters + hormones
13****TEST QUESTION
: network of protein fibers that
supports the cell structure and functions
(organelle movement, cell division and trafficking)
****TEST QUESTION
Cytoskeleton: network of protein fibers that
supports the cell structure and functions
(organelle movement, cell division and trafficking)
14What are the 3 cytoskeleton components?
, ,
What are the 3 cytoskeleton components?
Microfilaments, intermediate filaments, microtubules
15What intermediate is in epithelium?
Desmin
16What intermediate is found in Connective tissue (fibroblasts,
endothelial cells, chondroblasts and
mesenchymal cells)?
Vimentin
17What intermediate is found in Neuroglial (glial cells, astrocytes,
Schoeman cells and oligodendrocytes)?
Glial fibillary acidic protein (GFAP)
18In what cell type are neurons found (axons, dendrites, and neuronal appendages)?
Neurofilaments
19Diameter of microfilaments? Protein subunit?
7 nm, Actin
20Diameter of intermediate filament? Protein subunit?
10, several proteins
21Diameter of microtubule? Protein subunit?
25 nm, Tubulin
22TQ The nucleus houses the instructional information for homeostatic process in the form of
TQ The nucleus houses the instructional information for homeostatic process in the form of DNA
23TQ The nucleus site of gene regulation, and , where all machinery
reside
TQ The nucleus site of gene regulation, DNA replication and transcription, where all machinery
reside
24TQ The nucleus is encapsulated by a ( membrane)
TQ The nucleus is encapsulated by a nuclear envelop (double layered membrane)
25TQ The nucleus outer layer of nuclear envelop is continuous with
and contains
TQ The nucleus outer layer of nuclear envelop is continuous with rough endoplasmic reticulum
and contains nuclear pores
26TQ The nuclear pores are associated with , which allow the
passage of substance between nucleus and cytoplasm
TQ The nuclear pores are associated with nuclear pore complex, which allow the
passage of substance between nucleus and cytoplasm
27TQ Only proteins with are allowed in the nucleus
TQ Only proteins with Nuclear localization signal (NLS) are allowed in the nucleus
28TQ Only proteins with are allowed to exit the nucleus
TQ Only proteins with nuclear export sequence (NES) are allowed to exit the nucleus
29TQ The inner membrane is supported by .
Intermediate filament types
TQ The inner membrane is supported by nuclear filaments (nuclear lamina).
Intermediate filament types A, B and C
30TQ DNA complexed with histones is called . Malignant cells contain more
TQ DNA complexed with histones is called chromatin. Malignant cells contain more euchromatin
31TQ Inclusion bodies called synthesize cells rRNA
TQ Inclusion bodies called nucleolus synthesize cells rRNA
32TQ
RER plays a role in (contains )
TQ
RER plays a role in protein
synthesis (contains ribosomes)
33TQ Smooth ER is responsible for
,
and , for muscle contraction
and
TQ Smooth ER is responsible for
steroidogenesis, fatty acid synthesis
and phospholipids, recycling
calcium ions for muscle contraction
and detoxification
34
Site for metabolism (biochemistry)( and protein
synthesis. It has " " (i.e. glycogen storgae vessels)
Cytosol
Site for metabolism (biochemistry)( and protein
synthesis. It has "inclusion bodies" (i.e. glycogen storgae vessels)
35 pathwya: Secretion is continuous and unregulated
Constitiutive pathwya: Secretion is continuous and unregulated
36 : Secretion is directed by hormonal or neural signal
Regulated pathway: Secretion is directed by hormonal or neural signal
37Golgi apparatus is divided into
receiving end of packaged
protein from RER ( -Golgi),
modifying Golgi where protein
modifications occur (Golgi stack)
and exporting Golgi, where
modified proteins are packaged
and sent to their destination
( -Golgi)
Golgi apparatus is divided into
receiving end of packaged
protein from RER (cis-Golgi),
modifying Golgi where protein
modifications occur (Golgi stack)
and exporting Golgi, where
modified proteins are packaged
and sent to their destination
(trans-Golgi)
38Proteins need a tag (localization signal)to reach their destination (i.e.
is the tag associated with proteins destined for the
lysosome)
Proteins need a tag (localization signal)to reach their destination (i.e.
mannose-6-phohpate is the tag associated with proteins destined for the
lysosome)
39Proteins without a tag become
Proteins without a tag become secretory proteins
40A (mannose-6-phosphate) targets new hydrolytic
enzymes to lysosomes- defects in the process leads to fatal childhood
lysosomal storage disease
A recognition marker (mannose-6-phosphate) targets new hydrolytic
enzymes to lysosomes- defects in the process leads to fatal childhood
lysosomal storage disease
41Lysosomes are made in the as coated vesicles
Lysosomes are made in the Golgi complex as coated vesicles
42 Disease a lysosomal enzyme is missing and causing cells to
accumulate compounds ( ). Accumulated material within neurons
interferes with function. It is a disease.
Tay-Sach's Disease a lysosomal enzyme is missing and causing cells to
accumulate compounds (gangliosides). Accumulated material within neurons
interferes with function. It is a lysosomal storage disease.
43TQ Mitochondria have their own and have a membrane
TQ Mitochondria have their own DNA and have a double-layer membrane
44TQ affect important systems in the body, nervous and muscles.
TQ Mitochondrial diseases affect important systems in the body, nervous and muscles.
45TQ
The outer membrane transports into the mitochondria
The inner membrane forms , called a , allow a for reactions
TQ
The outer membrane transports large proteins into the mitochondria
The inner membrane forms invaginations (folds), called a cristae, allow a large
surface area for reactions
46TQ Mitochondria is the primary site of (contains many enzymes for B-oxidation of fatty acid, production, cycle and oxidative
phosphorylation ) and has the proteins of the
TQ Mitochondria is the primary site of ATP synthesis (contains many enzymes for B-oxidation of fatty acid, acetyl-CoA production, tricarboxylic acid (TCA) cycle and oxidative
phosphorylation ) and has the proteins of the ETC
47TQ Cells requiring a lot of energy will have a lot of mitochondria per cell, most affected
in mitochondrial diseases. Development of or disease have been associated with higher mtDNA mutation rate
TQ Cells requiring a lot of energy will have a lot of mitochondria per cell, most affected
in mitochondrial diseases. Development of Parkinson or Alzheimer disease have been associated with higher mtDNA mutation rate
48Plasma membrane lipid composition varies by cell type,
fluidity is determined by and
- important!
Plasma membrane lipid composition varies by cell type,
fluidity is determined by lipid composition and
temperature- important!
49What are the 3 membrane proteins?
1. Phospholipids
2. Cholesterol
3. Glycolipids
50What are the three types of membrane proteins?
1. Lipid-anchored
2. Integral
3. Peripheral membrane
51TQ
Phospholipids are the major lipid of plamsa membrane. Hydrophillic head of , hydrophobic .
TQ
Phospholipids are the major lipid of plamsa membrane. Hydrophillic head of phosphate group, hydrophobic acyl tail.
52Phospholipids create create
Phospholipids create micelles create phospholipid bilayers
53The fatty acid in the phospholipid creates a “kink” in the chain,
which prevents tight packing –important for membrane fluidity
The unsaturated fatty acid in the phospholipid creates a “kink” in the chain,
which prevents tight packing –important for membrane fluidity
54What are the two phospholipids on the outer leaflet?
1. Phosphatidyl choline
2. Sphingomyelin
55What are the 3 phospholipids on the inner leaflet?
1. Phospatidylethanolamine
2. Phosphatidyl serine
3. Phosphatidylinositol
563 classes of sphingolipids are , , and
3 classes of sphingolipids are sphingomyelins, glycosphingolipids, and gangliosides
57TQ
Cholesterol is found in both leaflets and provides to the lipid bilayer at normal body temp.
TQ
Cholesterol is found in both leaflets and provides stability to the lipid bilayer at normal body temp.
58TQ
of the lipids in the membrane can be cholesterol
TQ
50% of the lipids in the membrane can be cholesterol
59Cholesterol aids in stifferning the membrane and can flip easily. can move laterally, rotate, or flex. They rarely do .
Cholesterol aids in stifferning the membrane and can flip easily. Phospholipids can move laterally, rotate, or flex. They rarely do flip.
60Glycolipids
- component
- group is a
carbohydrate
Glycolipids
-Minor component
-Polar head group is a
carbohydrate
61Glycolipids
- are two fatty
acyl chain
-Important in cel-cell
interactions
Glycolipids
-Hydrophobic are two fatty
acyl chain
-Important in cel-cell
interactions
62Glycolipids
- type
-Pathogen recognition
- formation
Glycolipids
-ABO blood type
-Pathogen recognition
-Glycocalyx formation
63Fluid Mosaic Model
A fluid like
bilayer where lipids
and proteins are
embedded
Fluid Mosaic Model
A fluid like
phospholipid
bilayer where lipids
and proteins are
embedded
64TEST QUESTION
Large uncharged
molecules need
transporters
TEST QUESTION
Large uncharged polar
molecules need
transporters
65TQ
Ions need
TQ
Ions need channels
66-Only
molecules diffuse
through the PM
- To a lesser extent
polar
molecules
-Only hydrophilic
molecules diffuse
through the PM
- To a lesser extent
small uncharged polar
molecules
673 examples of hydrophobic molecules that diffuse through the membrane
O2, CO2, N2
68Homeostasis is achieved when
=
Homeostasis is achieved when
Input = Output
69How does a sodium/potassum work?
Maintains a gradiant where 2K+ come in and 3+ Na+ leave
70Bilayer has TM proteins that are
active pumps to maintain
concentration gradients; e.g.
Bilayer has TM proteins that are
active pumps to maintain
concentration gradients; e.g. Na-K
pump
71Concentration gradient is
Concentration gradient is potential
energy
72NO ATP = NO , you lose the
concentration gradient-cell dies
NO ATP = NO pump, you lose the
concentration gradient-cell dies
73Proteins that are either
into the bilayer or
to the bilayer
Proteins that are either integrated
into the bilayer or covalently bound
to the bilayer
74The integrated proteins are
imbedded in the bilayer,
amino acids are
associated with the hydrophobic
The integrated proteins are
imbedded in the bilayer,
hydrophobic amino acids are
associated with the hydrophobic
fatty acyl chairs
75The non embedded integral
membrane proteins are anchored to
a or by a
The non embedded integral
membrane proteins are anchored to
a lipid or GPI by a covalent bond
76TEST QUESTION
2 examples of GPCR
Adrenergic receptors, muscarinic
receptors
77TEST QUESTION
Example of ligand binding receptor
Insulin receptor
78TEST QUESTION
Example Transport proteins i.e. pump, carrier,
pores and ion channels
Na+/K+ ATPase pump
79TEST QUESTION
Example of Enzymes
GPI linked proteins: Carbonic
anhydrase
80TEST QUESTION
2 example of adhesion molecules
Integrins, cadherins
81 are important in important in excitable
cells (neurons and
muscle cells)
Ion channels are important in important in excitable
cells (neurons and
muscle cells)
82Ion channels are classifed by their
,
and mechanism of
Ion channels are classifed by their
selectivity, conductance
and mechanism of gating
83Majority of Ion channels
are
Majority of Ion channels
are selective
84Conductance is the property of the channel, how many ions are allowed through,
can vary based on ( vs. )
Conductance is the property of the channel, how many ions are allowed through,
can vary based on ionic movement (inward rectifier vs. outward rectifier)
85 channel, important in coupling
electrical signal to calcium release: neuronal excitability, muscle
contraction, etc. (high conductance and selective for potassium)
Calcium activated potassium channel, important in coupling
electrical signal to calcium release: neuronal excitability, muscle
contraction, etc. (high conductance and selective for potassium)
86TEST QUESTION
The gate can be a
(neurotransmitter/ or an
intercellular messenger),
(such as
pressure or stretch),
(membrane
potential)
TEST QUESTION
The gate can be a ligand
(neurotransmitter/ or an
intercellular messenger),
mechanical (such as
pressure or stretch),
voltage (membrane
potential)
87In the cases when there is
no gate, the ion channel is
always in an
In the cases when there is
no gate, the ion channel is
always in an open state
88Different types in different cells, the potassium channel all responsd to effect
in the cell- ligand gated ( , , )
Different types in different cells, the potassium channel all responsd to cAMP effect
in the cell- ligand gated (cardiac, neuron, smooth muscle)
89Stretch gated ions are sensed by the i.e., stretch are translated into
or signals
Stretch gated ions are sensed by the plasma membrane i.e., stretch are translated into
chemical or electrical signals
90Cell-matrix adhesion molecules: Integrins, allow
communication between a cell & its surrounding tissue
(adaptation). Critical for cell ,
cellular &
Cell-matrix adhesion molecules: Integrins, allow
communication between a cell & its surrounding tissue
(adaptation). Critical for cell development, growth,
cellular shape & mobility
91What are two examples of cell-to-cell communication?
1. Cadherins
2. N-CAMs
92Cadherins: cell adhesion
molecules; e.g.,
Cadherins: Ca2+ dependent cell adhesion
molecules; e.g., glycoprotein
93N-CAMs: neural cell adhesion
molecules are part of the immunoglobulin family
& function in the migration of s &
development of
N-CAMs: Ca2+ independent neural cell adhesion
molecules are part of the immunoglobulin family
& function in the migration of immune cells &
development of axons
94GPI-linked class: function is
GPI-linked class: function is unclear
95Loss of cell adhesion molecules is observed in tumors
Loss of cell adhesion molecules is observed in metastatic tumors
96Peripheral membrane proteions are in the membrane
and bound. They are loosely attached to the
membrane on either side by
Peripheral membrane proteions are not embedded in the membrane
and not covalently bound. They are loosely attached to the
membrane on either side by
ionic interactions
97 is a classical
example, anchors the
cytoskeleton of red blood
cells to an integral meme
bane protein
Ankyrin is a classical
example, anchors the
cytoskeleton of red blood
cells to an integral meme
bane protein
98Ankyrin is loosely bound to the plasma
membrane by the integral membrane protein
( ) and holds or “anchors”
network to Band 3
Ankyrin is loosely bound to the plasma
membrane by the integral membrane protein
(Band 3) and holds or “anchors” sceptrin-actin
network to Band 3
99Plasma membrane receptors include
1. Ligand gated ion ( )
2. Receptor kinases ( )
3. G protein coupled receptoprs ( , , and )
Plasma membrane receptors include
1. Ligand gated ion (nitoconic receptor)
2. Receptor kinases (tyrosine kinases)
3. G protein coupled receptoprs (GPCRs, muscarinic, and adrenrgic)
100Intracellular receotors include transcription factors ( )
Intracellular receotors include transcription factors (glucocorticoid receptors)
101 = targets same cell
= ajacent cell
= Bloodstream
Autocrine = targets same cell
Paracrine = ajacent cell
Endocrone = Bloodstream
102Homeostasis is achieved when
=
Homeostasis is achieved when
Input = Output