GATech BIOS 1208 Comprehensive Flash Cards

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1
Phylogenetic Tree
A diagram showing the evolutionary relationships between different species
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Speciation
Formation of new species
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Taxa / Taxon
One or more groups of organisms that form an evolutionary unit
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Lineage
A taxon and all its ancestors
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Synapomorphy
A characteristic present in related species and their common ancestors
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Outgroup
The least related taxon in a tree
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Monophyletic Group / Clade
A common ancestor and all of its descendants
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Paraphyletic Group
A monophyletic group which one or more descendants are excluded
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Polyphyletic Group
A monophyletic group which lacks the common ancestor
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Evograms
Phylogenetic trees with a timescale
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Hadean Eon
The earliest eon, before compelling evidence of life (4.6 BYA - 4.0 BYA)
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Archaean Eon
The eon which contains the evolution of early life (4.0 BYA - 2.5 BYA)
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Proterozoic Eon
The eon which contains oxygen accumulation and the flourishing of early microbial life (2.5 BYA - 542 MYA)
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Phanerozoic Eon
Rapid increase in animal and plant life (542 MYA - Now)
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Prokaryotes
The first living organisms, containing bacteria and archaea
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Peptidoglycan
Bacterial cell walls are made of this
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Polysaccharides
Archaean cell walls are made of this
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Binary Fission
A method of asexual reproduction used by prokaryotes
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Horizontal Gene Transfer
The transfer of information through plasmids, a process that makes classifying the relatedness of prokaryotes difficult
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Phototrophs
Organisms that obtain their energy from light
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Chemotrophs
Organisms that obtain their energy from chemical compounds
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Autotrophs
Organisms that obtain carbon from inorganic sources
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Heterotrophs
Organisms that obtain carbon from other organisms
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The Oxygen Revolution
The time span where cyanobacteria produced free oxygen that reacted with iron to precipitate out of the ocean
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Endosymbiotic Theory
The theory that states an Archaean cell absorbs an aerobic bacterial cell that eventually resulted in the mitochondria
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Archaean Eon (2.5 BYA)
The first cyanobacteria arose in this eon
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Proterozoic Eon (1.6 BYA)
The first single-celled eukaryotes arose in this eon
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Proterozoic Eon (1.4 BYA)
The first multicellular algae arose in this eon
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Proterozoic Eon (635 MYA)
The first multicellular animals arose in this eon
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Phanerozoic Eon (542 MYA)
The Cambrian explosion occurred at the start of this eon
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Archaeplastidia
Two engulfment events resulted in chloroplasts, this is the lineage that included green plants
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Paulinella
Two engulfment events resulted in chloroplasts, this is the lineage that included amoebas
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Unique Traits of Eukaryotes
Cells with Nuclei, Mitochondria, A Cytoskeleton, Linear Chromosomes, Mitosis, Meiosis
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Ploidy
Number of copies of each chromosome
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Haploid
1n Ploidy
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Diploid
2n Ploidy
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Fertilization
The joining of male and female gametes
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Haplontic Life Cycle
The observed organism is haploid, the zygote immediately undergoes meiosis and produces spores
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Diplontic Life Cycle
The observed organism is diploid, the zygote undergoes mitosis and spores are never produced
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Haplodiplontic Life Cycle (Alternation of Generations)
Organisms with this life cycle have both a haploid and diploid multicellular state
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Sporophytes
The diploid multicellular state in alternation of generations
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Gametophytes
The haploid multicellular state in alternation of generations
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Protists
Any eukaryote that does not fall into the category of plant, animal, or fungus
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Benefits to Living in Water for Plants
Can't dry out, external support structure, sperm and egg can swim to each other, water filters out UV light
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Benefits to Living on Land for Plants
Sunlight is more abundant, carbon dioxide is more abundant, early lack of predators
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Waxy Cuticle
Prevents plants from drying out through evaporation
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Stomata
Pores on a plant that allow for the exchange of gases
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Roots
Anchors plants and allows for water absorption
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Mycorrhizal Fungi
Fungi that surround plant roots to help them obtain water and minerals
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Rhizoids
A thin, rootlike structure that anchors plants and absorbs water and nutrients
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Bryophytes
Nonvascular plants like mosses, liverworts, and hornworts that are physically tied to water and have a gametophyte-dominated life
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Lycophytes
Seedless vascular plants like ferns and horsetails that still require water for reproduction and the sporophyte is larger than the free living gametophyte
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Xylem
Vascular tissue that carries water upward from the roots to every part of a plant
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Phloem
Vascular tissue that moves sugars throughout a plant
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Lignin
Substance in plants that makes their cell walls rigid
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Gymnosperms
Seeded, nonflowering plants like trees that use pollen and seeds to produce and protect sperm and eggs respectively and also have attached gametophytes
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Angiosperms
Flowering plants that allow for pollinators to move pollen, have double fertilization, have fruits, and attached gametophytes
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Endosperm
A nutrient-rich tissue that grows alongside a sperm cell in some plants
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Cambrian, Ordovician, Silurian, Devonian, Carboniferous, Permian, Triassic, Jurassic, Cretaceous, Paleogene, Neogene, Quaternary
Name the Phanerozoic Eon's periods

(Camels Often Sit Down Carefully; Perhaps Their Joints Creak? Please Need Quick!)
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Paleozoic, Mesozoic, Cenozoic
Name the Phanerozoic Eon's Eras
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Bryophytes (Alternation of Generations)
In Alternation of Generations, when the haploid gametophyte is larger than the sporophyte
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Seedless Vascular Plants
In Alternation of Generations, when the sporophyte is larger than the gametophyte, which is free-living
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Chitin
The substance that makes up fungal cell walls
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Osmotrophy
The external digestion of food, used by fungi
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Mycelium
The body of a multicellular fungus
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Hyphae
The branching, threadlike tubes that make up the bodies of multicellular fungi
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Fruiting Bodies
Fungi produce spores in reproductive structures called
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Exoenzymes
Enzymes which digest organic matter for fungi
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Plasmogamy
Fusion of two haploid cells with independent nuclei
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Karyogamy
The fusion of nuclei to form a diploid nucleus
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Saprophytic Fungi
Fungi that get their energy from decaying organic matter
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True Tissues
A group of similar cells that exist in all plants except for sponges
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Eumetazoans
Animals that have true tissues
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Cnidaria
The phylum that likely includes the first eumetazoan
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Cephilization
The concentration of nerves in a single area
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Diploblast
An animal that develops from two embryonic germ layers
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Triploblast
An animal that develops from three germ layers
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Ectoderm
The outermost germ layer
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Endoderm
The innermost germ layer
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Coelom
A fluid filled body cavity
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Mesodermal Tissue
The middle germ layer in a triploblast
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Nematoda
Ancestors of roundworms, the first to develop a complete digestive system
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Flatworms (Platyhelminthes)
Species and lineage that lost the coelom and the complete digestive system, they also have two nerve cords
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Tracheae
Tiny tubes in insect body that deliver oxygen directly to metabolizing tissues
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Ventral Nerve Cord
Belly-side nerve cord
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Dorsal Nerve Cord
Back-side nerve cord
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Porifera
Sponges that lack true tissue and symmetry
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Acoelomorpha
Flatworms, but not true flatworms
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Protostomes
Group of organisms with cephalization, mouth-first digestive tract, organ systems
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Arthropoda
The phylum of insects
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Deuterostomes
The anus develops first in the digestive tract
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Chordata
All animals with a notochord, dorsal hollow nerve chord, pharyngeal slits, and a muscular post-anal tail
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Notochord
A flexible rod that supports a chordate's back
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Dorsal Hollow Nerve Cord
Nerve cord found in all chordates that forms the spinal cord and brain
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Pharyngeal Slits
Slits that allow for the filtering of water and food
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Pharynx
The space behind your mouth, your throat
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Muscular Post-Anal Tail
Structure that allows for locomotion in water and balance
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Craniata
Chordates with a cranium
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Myxini (Hagfish)
Only living species with a skull but no vertebral column or jaw
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Vertebrata
Chordates that have a vertebral column
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Agnathostomes
Jawless fish species without jaw
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Hyperaortia (Lampreys)
Living agnathostomes
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Gnathostomes
Vertebrates that have a jaw
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Placoderms
Early example of gnathostomes
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Chondrichthyes
Fish that have a skeleton of cartilage
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Osteichthyes
Fish with bony skeletons and lungs
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Sarcopterygii
Lobe-finned fishes
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Tetrapods
four-limbed vertebrates
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Tiktaalik
An intermediate species between lobe fins and limbs
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Amphibia
frogs, toads, and salamanders that live in both aquatic and land stages in life
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Amniota
Reptiles, birds, and mammals that are able to reproduce on land due to a specialized egg
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Sauropsids
Ancestors of reptiles, birds, dinosaurs, snakes, and lizards
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Reptilia
Class of animals with scaly skin made of keratin
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Anapsid
Solid skull with no holes behind eyes
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Diapsids
Skull with two holes on each side of the head
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Ectotherms
An animals that warms itself mainly by absorbing heat from its surroundings
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Aves
Class of birds
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Endotherms
Warm blooded animals
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Synapsids
Ancestors of mammals, single hole behind each eye in skull
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Mammalia
Class of mammals
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Eutherians
Placental mammals
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Marsupials
Mammals that carry their young in a pouch
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Monotremes
Mammals that lay eggs
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Rodinia
Precambrian supercontinent
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Pangea
Most recent supercontinent
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end-Ordovician
The first mass extinction, second largest, likely caused by glaciation and global warming
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end-Devonian
The second mass extinction, primarily affected marine species, causes are unknown
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end-Permian
The third and largest mass extinction, likely caused by extended volcanic activity
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end-Triassic
The fourth mass extinction, causes are unclear
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end-Cretaceous
The fifth mass extinction, a meteor impact that wiped out the dinosaurs
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Milankovitch Cycles
The effect of slight changes in Earth's orbit on the climate
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The Medieval Climate Anomaly
A period of time where the climate was 0.1 - 0.2 C higher than normal
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The Little Ice Age
A period of time where the climate cooled 1 C compared to normal
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Morphogenesis
Development of an organism's overall shape
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Induction
Cell-to-Cell Communication
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Budding
Growth of a new cell from an older cell
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Fragmentation
A mature organism splits into fragments that grow into new organisms.
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Parthenogenesis
Development of an unfertilized egg into a new organism
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Polyembryony
Fertilized egg splits to create identical clones
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Vegetative Growth
Growth of new organisms without spores or gametes in plants
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Stressful Conditions
In what conditions will organisms that can reproduce both sexually and asexually prefer to reproduce sexually?
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Sexual Selection
The concept that some organisms can be choosy about reproducing
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Sexual Dimorphism
Males and females are distinct from one another due to this
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Secondary Sexual Characteristics
Characteristic differences between males and females due to sexual dimorphism
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Intrasexual Selection
Direct Male Competition
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Male-Male Aggression
Intrasexual selection where males fight physically
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Courtship Rituals
Intrasexual selection where males engage in dances or create elaborate nests
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Lekking
Intrasexual selection where many males gather and display at the same time
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Intersexual Selection
Female Choice
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Good Gene Hypothesis
Hypothesis as for why females choose males with more showy characteristics
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Male Guarding
A male remaining by a female until the eggs are fertilized
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Copulatory Plugs
Sticky residue that blocks the female reproductive tract
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Elaborate Penis Morphology
Structures that can remove the sperm of previous males
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Large Testes
A large amount of ejaculate can flush out that of previous males
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Cryptic Female Choice
The ability of a female to choose which sperm fertilizes her eggs
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Parental Investment
Effort from one or both parents to increase the offspring's survival rate
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Monogamy
One male and one female are paired for the season or longer
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Polygamous
One male or female with many females or males
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Polygynous (Harem Mating)
One male with many females
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Polyandrous
One female with many males
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Promiscuous
Many males mate with many females
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Testes
Where males produce sperm
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Epididymis
Where males store sperm
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Ova
Female eggs that mature in the ovaries
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Spermatheca
A sac that females can store sperm in for later fertilization found in insects and mollusks
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Cloaca
A feature that functions as the digestive, excretory, and reproductive systems in birds and reptiles
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Uterus
An organ that houses developing offspring found in females, some species have multiple
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Gametogenesis
The production of gametes
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Ovaries
Produces and develops eggs
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Oviducts (Fallopian Tubes)
Site of fertilization, transports eggs to uterus
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Cervix
Passage between uterus and vagina
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Pituitary Gland
The gland that produces FSH and LH
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Follicles
Structures that the egg develops in inside of the ovaries
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Corpus Luteum
The ruptured follicle that prevents fertilization
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Oogenesis
Egg Production
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Oogonia
Egg Stem Cells
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Oocytes
Immature, diploid egg cells produced by the division of oogonia
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Unequal Cytokenesis
The reason that oocytes only produce one egg after meiosis
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Follicle Stimulation Hormone (FSH)
Hormone that promotes the development of egg cells
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Lutenizing Hormone (LH)
Hormone that promotes the release of the most mature egg
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Progesterone
Hormone that suppresses the release of FSH and LH to allow for fertilization
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Estrogen
Hormone that enhances the activation and suppression of follicles, among other things
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Follicular Phase (1/2 of Cycle)
Phase of the Ovarian Cycle where eggs mature in follicles
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Ovulation (1/4 of Cycle)
Phase of the Ovarian Cycle where a mature follicle ruptures to release an egg
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Luteal Phase
The phase of the Ovarian Cycle where the corpus luteum suppresses the growth and release of other follicles
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Human Chorionic Gonadotropin (hCG)
Hormone released upon a fertilized egg implanting, preventing the degredation of the corpus luteum
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Scrotum
Structure that carries and supports testes
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Seminal Vesicles
Structure that contributes to 60% of semen's composition (Alkaline Solution, Mucus, Fructose, Ascorbic Acid, Prostaglandins)
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Prostate Gland
Structure that contributes to 30% of semen's composition (Citrate, PSA)
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Bulbourethral Glands
Structures that clean the urethra at ejaculation
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Seminiferous Tubulus
Specific structure within the testes responsible for the production of sperm
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Sertoli Cells
Cells that protect the sperm stem cells
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Cells of Leydig
Cells that produce testosterone and regulate sperm development
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Vas Deferens
Location where sperm is transferred during ejaculation and forms the ejaculatory duct with the seminal vesicles duct
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Prostaglandins
Group of lipids that stimulate muscle contractions in the uterus
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Citrate
Organic compound that promotes sperm motility
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Spermatogenesis
Sperm Production
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Spermatogonia
Sperm Stem Cells
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Spermatocyte
Cells in the process of becoming spermatids and eventually sperm
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Spermatids
Immature sperm cells
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Inhibin
Hormone that's released when sperm count is too high
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Hormone-Based Birth Control
Birth control that blocks the production of FSH and LH through progesterone
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Intrauterine Devices (IUDs)
Birth control implant that creates a toxic environment for sperm
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Tubal Ligation
Birth control that seals the oviducts
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Fertilization
The union of gametes to form a zygote
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Cleavage
Rapid rounds of mitotic cell division
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Gastrulation
Movement of cells to create tissue layers
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Organogenesis
Organ and tissue formation via division and differentiation
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Jelly Layer (Zona Pellucida)
Structure composed of glycoproteins that attracts sperm to the egg
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Vitelline Envelope
Second membrane outside of the cell membrane of the egg
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Corticle Granules
Vesicle containing enzymes that will degrade the proteins holding the vitelline envelope
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Bindin Proteins
Species-specific proteins that will bind to egg membrane receptors
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Acrosome
Organelle containing enzymes that will degrade the jelly layer of the egg
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Polyspermy
The fusion of more than one sperm with an egg, will result in zygote death
215
Acrosome Reaction
Part of fertilization that allows for a sperm to fuse with the egg
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Electrical Depolarization
Fast block for polyspermy
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Cortical Reaction
Part of fertilization which degrades the bindin receptors
218
Fertilization Envelope
Slow block to polyspermy, where the vitelline envelope is pulled away
219
Blastomeres
A zygote evolves into these smaller cleavage-stage cells
220
Blastula
The name for an embryo composed of at least 100 blastomeres
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Blastoderm
The first embryonic tissue
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Blastocoel
Yolk-filled cavity inside the blastoderm
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Blastocyst
The mammalian blastula
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Trophoblast
outer layer of blastocyst that will become the embryonic portion of the placenta
225
Cytoplasmic Determinants
mRNAs or Proteins that are asymmetrically distributed, resulting in cells with different information and functions
226
Yolk Polarity
When yolk is heavy enough to sink and influence the development of a head and body
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Gastrula
The embryo when it has three tissue layers following the blastula
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Archenteron
The embryonic gut formed by the endoderm
229
Ectodermal Structures
Nervous System, Skin Epidermis, Epithelial Lining of Mouth and Rectum
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Mesodermal Structures
Muscle Cells, Skeletal Cells, Circulatory System, Reproductive Organs
231
Endodermal Structures
Internal Organs, Liver, Pancreas, Epithelial Lining of Digestive and Respiratory Systems
232
Epithelial Tissue
Tightly packed sheets of cells that cover surfaces and line body cavities
233
Connective Tissue
Cells suspended in some form of matrix to support and connect other tissues
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Muscle Tissue
Keeps the body upright and allows for movement, contains actin and myosin
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Nervous Tissue
Involved in sensing stimuli and transmitting information, made of neurons and glia
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Amnion Tissue
Embryonic tissue protecting the embryo from shock and supports hydration
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Chorion Tissue
Embryonic tissue that facilitates gas exchange and respiration
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Allantois Tissue
Embryonic tissue that stores nitrogenous waste and assists in respiration
239
Yolk Sac
Transports nutrients from the yolk into the embryo
240
Neural Plate
The embryonic precursor to the central nervous system
241
Notochord
Structure that signals the neural plate to form a neural tube
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Somites
Structures formed by mesoderm that eventually become bones
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Hox Genes
Genes that determine body axes and segmentation
244
Sepals
Structures that protect flower buds before they open
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Petals
Brightly colored leaves that attract pollinators
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Stamens
Male plant reproductive structures containing anthers and filaments
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Anthers
Plant structure that contains microsporangia
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Microsporangia
Plant structure that produces microspores that develop into male gametophytes
249
Carpel
Female plant reproductive structure made of the stigma, style, and ovary
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Megasporangia
Structure that produces megaspores that develop into the female gametophyte
251
Stigma
Plant structure where pollen is deposited
252
Style
Plant structure that connects the stigma and ovary
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Tube Cell
Cell in mature pollen that grows into the stigma down into the ovary
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Generative Cell
Cell in mature pollen that travels through the tube cell and divides into two sperm cells
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Antipodal Cells
Cells in the embryo sac that will degenerate for nourishment
256
Polar Cells
Two cells in the embryo sac that will eventually form the triploid endosperm
257
Micropyle
The area of the embryo sac where sperm enters
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Synergid Cells
Two cells in the embryo sac on either side of the egg cell that guide the pollen tube
259
Pollination Syndromes
Different methods by which plants are pollinated
260
Colored, Highly Scented Flowers
Pollination Syndrome for Bees, Butterflies, Wasps, or Flies
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White, Highly Scented Flowers
Pollination Syndrome for Moths and Bats
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Brightly Colored, Odorless Flowers
Pollination Syndrome for Birds
263
Small, Green, Petal-less Flowers
Pollination Syndrome for Wind
264
Suspensor
The basal cell of a plant zygote that acts as a route for nutrition from plant to embryo
265
Cotyledons
Embryonic leaves which serve as energy and nutrient storage
266
Desiccation
The process of dehydrating a seed and slowing metabolism
267
Propulsion-Dispersed Fruits (Violets)
Dispersal through "explosions" out of the plant
268
Wind-Dispersed Fruits (Dandelions)
Dispersal through wing or umbrella-like appendages
269
Water-Dispersed Fruits (Coconuts)
Dispersal through light and buoyant fruits
270
Animal-Dispersed Fruits
Dispersal through either hooked fruits or very sweet fruits
271
Bird-Dispersed Fruits
Dispersal for fruits that are specifically very brightly colored
272
Mammal-Dispersed Fruits
Dispersal for fruits that are specifically very highly scented
273
Auxin
A plant hormone that forms a gradient, serving a function similar to a cytoplasmic determinant
274
Hypocotyl
Embryonic plant structure that will develop into the stem
275
Radicle
Embryonic plant structure that will develop into the roots
276
Root System
System that supports the plant absorbs water and minerals, typically underground
277
Shoot System
System consisting of stems, leaves, and reproductive parts, usually aboveground
278
Tap Root Systems
A main root that grows straight down, common in dicots
279
Fibrous Root Systems
Dense network of roots closer to the surface, common in monocots
280
Bulbous Roots (Onions)
Roots for storing starch
281
Prop Roots
Aboveground roots that provide additional support
282
Pneumatophores
Aboveground roots that facilitate gas exchange for plants in oxygen-poor water
283
Epiphytic Roots (Spanish Moss)
Roots that collect water and nutrients from air and dust
284
Haustoria (Mistletoe)
Roots of parasitic plants that burrow into another plant
285
Nodes (Plants)
Points of attachments for leaves and flowers on a stem
286
Internodes (Plants)
Regions of the stem between two nodes
287
Apical Bud
Site of new growth on a stem, containing the apical meristem
288
Axillary Buds
Buds present where the leaf meets the stem, may be a site for more growth
289
Herbaceous Stems
Soft and typically green stems
290
Woody Stems
Hard and wooded stems
291
Unbranched Stems
A single stem
292
Branched Stems
Stems with divisions and side stems
293
Petiole
Structure that attaches leaves to the stem
294
Meristematic Tissue
Tissues in plants that are functionally equivalent to stem cells in animals
295
Permanent Tissue
Tissues that are any plant cells no longer actively dividing
296
Dermal Tissues
Tissues that protect and cover the plant, controlling gas exchange and water absorption
297
Vascular Tissues
Plant tissue that transports water, minerals, and sugars through the xylem and phloem
298
Ground Tissue
Plant tissues that carry out multiple functions based on location
299
Epidermal Cells
Cells that provide protection and prevent water loss in dermal tissue
300
Guard Cells
Two cells that control each leaf stomata in dermal tissue

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