Exam 2

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1
syngamy
fusion of gametes
2
reproductive conflict examples
mating and remating-males favor frequent mating and remating, females do not
duration of mating-males prefer longer mating to maximize the amount of sperm transferred, females prefer shorter bc it can be harmful due ot predation or antagonistic mating structures
3
intra-locus sexual conflict
where males and females have different desired traits for the same genes.
4
consequence of inescapable intra-locus conflict
intermediate trait suboptimal for both sexes
5
why do DNA traits display higher homoplasy
only 4 options(ACGT)
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What is one evolutionary innovation that is thought to have evolved as a mechanism to escape intralocus sexual conflict
Sex chromosomes-allow sex specific traits
7
3 advantages of asexuality
avoid mate finding cost
two fold reproductive advantage(all alleles come from one parent as opposed to two)
Maintains “co-adapted” gene combinations(gene combos that create higher fitness always inherited together)
8
3 Advantages of Sex
escape from deleterious mutations due to drift(mullers ratchet)
increases the efficiency of selection for beneficial mutations(Fisher-Muller effect)
increases the rate of response to sexually-reproducing antagonists(parasites) (“Red Queen Hypothesis”)
9
Muller's ratcher(plus 1 example)
deleterious mutations eliminate high fitness genes over time via genetic drift
sex can escape by recombining high fitness genes and "reverting the ratchet"
eg. asexuals have no way of reducing deleterious mutations

ex.-Y chromosome is shrinking due to no recomb
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Fisher-Muller Model
increases the efficiency of selection for beneficial mutations
when multiple beneficial mutations arise in a population asexuals have no way of fixing them bc of interference, sexuals do
11
red queen hypothesis and example
sex is favored because it enables continual counter-adaptation (via rare and/or novel genotypes) to escape ecological antagonists (parasites, predators, etc.)
increases the rate of response to sexually-reproducing antagonists

ex.-snail pops in new zealand show higher male freq(thus higher sex) where parasites are most common
12
anisogomy
sexual reproduction that involves the fusion of gametes of different sizes
13
sexual selection
a consistent difference in reproductive success for individuals that differ in access to mates or reproductive opportunities
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intersexual selection
on differences in attractiveness to the other sex
typically female choice of male quality
15
intrasexual selection
on direct competition for mates between members of one sex
often male-male competition
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sexual dimorphism
differences between males and females
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factors for lifetime success between males and females
males invest less in offspring than females
increased mating in females(beyond certain minimum) does not increase lifetime success, whereas in males it greatly increases lifetime success
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intrasexual selection examples
resource aquisition(better nuptial gifts)
mate access(mate guarding, combat)

Larger marine iguanas maintain larger/ better territories and have more reproductive access to females
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intersexual selection examples
direct and indirect benefits
"handicap" indicates good genes

ex.-longer tails on birds show they are able to survive with larger chance of predation
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direct vs indirect benefit of male traits
direct-provide a direct fitness increase in the recipient(use of territory, nuptial gift, disease free mate)
indirect-fitness increases conferred on offspring(better genes)
21
indirect benefit hypothesis'
good genes hypothesis-preferences are for traits that act as honest signal of father’s genetic quality(ie higher offspring fitness)
sexy son's hypothesis-preferences are for traits that will increase the mate-attracting or –acquiring ability of sons(ie higher offspring sexual desirability)
22
selection strenght and fitness variation correlation
high variaition=strong selection
low variation=low selection

we expect lower variation in mating success in 'choosy' sex, higher in 'competing' sex
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three mating system types
polygny-several females per male
polyandry-several males per female
monogamy-one mate per individual
24
sexual selection variation in mating systems
polygny-low female mating variance, high male maiting variance
polyandry-high female mating variance, low male mating variance
monogamy-variation in mating is equal
25
parsimony
the simplest explanation is prefered
26
sources of homoplasy
Convergence- the independent evolution in different lineages of similar derived characters
Convergence is often due to parallel ‘solutions’ to the same That is, convergence is often
due to the same ecological challenge. often due to the action of natural selection

reversal-can incorrectly imply distant ecolutionary relationships
27
example of phylogeny to understand trait evolution
chameleons, phylogeography showed the dispersion theory to be true
28
species range change ex.
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why is there a hierarchical oragnization to species
descent with modification
30
using phylogenetic trees (inferences) to
resolve a practical/ real-world question
the relative age of two species, which evolved more recently.
31
homeotic genes
genes that control development of body structures
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example of gene expression causing phenotypic difference
gremlin gene in ducks and chickens causes cell death. expression in chickens causes lack of webbing, vs non expression in ducks causes webbing
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heterochrony
changes in timing of gene expression
34
different results of gene duplication
neofunctionalization-new copy has different funciton
subfunctionalization-parts of new and old genes are functional and disfuncitonal
gene conservation-copy with same function is produced
nonfunctionlization-copy is disfunctional
35
example of adaptive gene loss
vtg gene responsible for transport of nutrients to egg yolk los tin humans as placention and lactation became primary form of provisioning
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trait diversity due to homeotic duplication and diversification
duplication of hox genes associated with emergence of vertebrates from ancestral cordate lineage
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example of gene duplication resulting in subfunctionalization and neofunctionalization
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narrow sense heritability
fraction of total variation in trait that is due to additive genetic variation
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how is heritability estimated
measuring the similarity of parents and offspring(parent offspring regression)
40
three strategies to identify environmental effects on heritability
twin studies-monozygotic vs dizygotic twins(heritability when MZ similarity>DZ similarity
common garden experiments-growing plants in greenhouse
cross fostering experiments-switching eggs
41
breeders eq
R=h^2S
R=response to selection(magnitude of change in offspring depends on:)
S=selection differential(magnitude of selection)
h^2=heritability

higher seleciton or heritability yields higher magnitude of change(R)
42
goal of quantitative trait mapping
estimating heritability
predicting R and S
estimating number of loci contributing to a trait
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qtl mapping procedure
• start with two different genotypes (parents) with different trait values
• cross these two parents to make a ‘hybrid’ (recombinant) population
• measure individuals for traits
• genotype individuals for molecular markers/alleles across the genome
• associate marker variation with trait variation, using statistics
44
example of qtl used for trait identification
beach mouse fur color
45
macroevolutionary patterns
periodic mass extinctions
Massive ‘adaptive radiations’, often after mass extinction events
Increase in net diversity over the history of the earth
46
adaptive radiation
The process that produces a cluster of species, all evolved from a
recent common ancestor, that occupy a variety of ecological niches
47
three evolutionary study types for ifentifying factors favoring diversity
experimental studies-direct evaluations of the function of variation
comparative studies-factors associated with differences in diversity among groups
studies of adaptive radiation-features of groups that have rapid rates of diversification
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evolutionary forces that favor diversification
increased intensity of natural selection from biological antagonists and the environment
increased intensity of sexual conflict with reproductive partners
ecological opportunity’: changes in selective conditions
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identify and explain at least one real-world example of a manipulative, or observational study of the factor(s) that favor trait variation
light/dark mice placed in light/dark substrate with owls
light/dark mice survived better in their respective substrates.
50
how do comparative studies work
compare groups (of the same age) to identify factors associated with differences in diversity between them
ex. sister group studies
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one example of a comparative study of diversity
Phytophagy in insects, in 11/13 sister group comparisons a shift to phytophagy was associated with higher species diversity
52
how we infer diversity from studies on adaptive radiation
By identifying unique features
of the adaptive radiation, we
can infer the conditions/forces
that contribute to increasing
diversity
53
example of adaptive radiation study and new features
‘Trophic specialization’ in African Cichlids and various new teeth types
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