1What are the two categories of the repiratory system?
Upper and Lower
2Parts of the Upper Respiratory System
-Nose
-Pharynx (throat)
-Larynx (voice box)
-Middle ear
-Eustachian (auditory) tubes
3Parts of the Lower Respiratory System
-Trachea (wind pipe)
-Bronchial tubes
-Alveoli (air scacs making in lungs)
-Pleura (lung membrane)
4Drainage systems involved in the URS
-Ducts from sinuses and lacrimal apparatus empty into the nasal cavity
-Auditory tubes from the middle ear empty into the upper part of the throat
5What happens in the alveoli
-Make up the lung tissue
-O2 and CO2 are exchanged between lungs and blood
6Pleura
-Double layered membrane
-Encloses the lungs
7A flap-like structure that covers the larynx when you swallow
Epiglottis
8How are microorganisms prevented from entering the respiratory system? (5)
-Hair in nasal pasages
-IgA antibodies in nasal secretions, mucus, tears
-Normal microbiota provides competitive exclusion
-Ciliary escalator
-Alveolar macrophages in lung tissue
9Moves inhaled particles towards troat, away from lower respiratory tract
Ciliary escalator
10Locate, ingest, and destroy microorganisms in lung tissue
Alveolar macrophages
11As you go lower down the respiratoy system
- There are more microbes
- There are less microbes
12Infection and inflammation of mucous membranes of the pharynx (sore throat)
Pharyngitis
13Infection of the larynx (voice box - can't speak)
Laryngitis
14Microbes causing pharyngitis can also infect tonsils causing inflammed tonsils
Tonsilitis
15Infection of the sinuses, involes heavy mucous discharge
Sinusitis
16Inflammation of the epiglottis (most life threatening disease of the URS)
Epiglottitis
17Tests for detecting infections (8)
-Cutaneous test
-Rapid antigen test
-PCR
-Serological tests
-Blood test
-Agglutination test
-Culture selective media
-Cytopathic effects
18Testing on the skin (allergy and tuberculosis)
Cutaneous test
19Using a test to look for antigens (covid, strep A); fast, cheap, at home
Rapid antigen tests
20Detects and amplifies and piece of nucleic acid to see if organism is present
PCR
21Tests blood serum for antibodies (ELISA, complement fixation, strip tests)
Serological tests
22Tests for chemicals in the blood (blood counts)
Blood test
23Clumping
Agllutination test
24Steptococcal Pharyngitis (common name)
Strep Throat
25What is the Etiological agent of Steptococcal pharyngitis
Streptococcus pyogenes
26Is Streptococcus pyogenes Gram positive or Negative
Gram Positive
27Signs and Symptoms of Streptococcus pyogenes
-Local inflammation
-Fever
-Tonsilitis
-Enlarged lymph nodes
-Otitis Media
28Otitis Media (common name)
Ear ache
29Virulence factors of Streptococcus pyogenes
-M protein
-Streptokinase
-Steptolysins
30M protein
-Attachment
-Resistant to phagocytosis
31Streptokinase
Extracellular enzyme that lyse fibrin clots
32Streptolysins
Toxins that are cytotoxic to tissue cells, RBCs, and leukocytes
33Detection and treatment of Streptococcus pyogenes
Rapid antigen test
Antibiotics
34Etiological agent of scarlet fever
Stroptococcus pyogenes strain that has a lysogen (produces a toxin)
35Signs and symptoms of scarlet fever
-Red skin rash
-Fever
-Strawberry tounge (looses upper membrane)
36Virulence factors of scarlet fever
-Same as strep throat
-Erythrogenic toxin (reddening)
-Only the lysogenized strain
37Treatment of scarlet fever
Antibiotics (to prevent rheumatic fever)
38Etiological agent of diptheria
Corynebacterium diptherium (pleomorphic)
39Is Corynebacterium diptherium gram positive or negative?
Gram positive
40Signs and symptoms of diptheria
-Sore throat
-Fever
-Malaise
-Swelling of the neck
-Tough gray membran eforms in throat
41Virulence of diptheria
-Bacturium is not invasive
-Exotoxin interferes with protein synthesis
-Strain carrying lysogen
-Can be fatal if heat and kidneys are affected
42Prevention of diptheria
DTaP vaccine (Diptheria toxoid vaccine - inactivated diptheria toxin)
43Etiological agents of otitis media
-Steptococcus pneumoniae (most common)
-Haemophilus influenzae
-Moraxella Catarrhalis
-Streptococcus pyogenes
44Signs and Symptoms of otitis media
-Formation of pus behind the eardrum
-Inflammation
-Pain
-Fever
45Virulence factors of otitis media
Common in early childhood (eustachian tubes are more horizontal)
46Common name of pharyngitis
Common cold
47Etiologigal agents of pharyngitis
-More than 200
-Most common = Rhinovirus
-Coronavirus
48Signs and symptoms of pharyngitis
-Sneezing, nasal secretions
-Congestion
-Usually no fever
49Inflammation of the bronchia
Bronchitis/ bronchiolotis
50LRS disease involving alveoli
Pneumonia
51Common name of pertussis
Whooping cough
52Etiological agent of pertussis
Bordetella pertussis
53Is Bordetella pertussis gram negative or gram positive
Gram negative
54What kind of organism is bordetella pertussis (regarding oxygen)
Obligate aerobe
553 stages of pertussis progression
-Catarrhal stage
-Paroxysmal stage
-Convalescence stage
56Catarrhal Stage of pertussis
Initial stage resemblig a common cold
57Paroxysmal stage of pertussis
-Prolonged intense coughing, gasping for air (lasts 1-6 weeks)
-Bacteria attches to ciliated cells in trachea (interferes w escalator)
-Damage to ciliated cells of trachea (mucus accumulates)
58Convalescence stage of pertussis
May last for months
59Virulence factors of pertussis
-Capsule
-Two toxins: tracheal cytotoxin and pertussis toxin
60Tracheal Cytotoxin
Damages ciliated cells (not endo/exo toxin)
61Pertussis toxin
Enters bloodstream associated with systemic signs and symptoms (exotoxin)
62Prevention of pertussis
-DTaP (acellular pertussis) vaccine
-Booster
-Vaccine requirements for students
63Etiological agent of tuberculosis
Mycobarcterium tuberculosis
64Is tuberculosis gram positive or negative?
Acid fast!
65What kind of organism is tuberculosis? (regarding oxygen)
Obligate aerobe
66Signs ans symptoms of tuberculosis
-Host is usually unaware of infection
-Coughing, bloodstained sputum
-Weight loss
-Can be fatal
67Virulence factors of tuberculosis
-Acquired by inhalation
-Mycolic acids (in cell wall) stimulate inflammation
-Organisms that reach the lungs are phagocytized by aveolar macrophages (destroy the bacteria)
-Some bacteria may survive (infection present without symptoms)
68Waxy lipids (mycolic acids)
-Resistant to drying
-Resistant to digestion by phagocitic cells
-Prevents fusion w lysosome
-Replicates in phagocyte
69What happens when tuberculosis reaches the lungs (1st step)
90% of them are ingested by macrophages
10% survive (infection present w/o symptoms)
70What happens whne tuberculosis bacteria start multiplying inside macrophages (2nd step)
-more macrophages gather
-they form a layer called an early tubercle
-macrophages release cytokines that cause lung-dammaging inflamation
71Early Tubercule
A walled off lesion
72What happens a few weeks into a tuberculosis infection, when macrophages die, releasing bubercle bacili (3rd step)
-Form a caseous center (low O2 = bacteria do not grow)
-Latent TB (dormant)
-Lesion becomes calcified
73How can tuberculosis progress in some patients (4th step)
-Caseous center grows (forming air-filled cavity)
-Microbes can grow
74What happens when the tubercule ruptures (5th step)
Bacteria spills into bronchioles (spread to lungs, circulatory and lymphatic systems)
75Detection of tuberculosis
-Tuberculin skin test (purified protein derivitive introduced cutaneously -> T cells react)
-Rapid Blood test (better for vaccinated people)
-PCR test (higher specificity)
76What does a positive tuberculin skin test mean
Current or previous infection or vaccination
Needs x-ray or CT exam
77Treatment of tuberculosis
Minimum of 6 months of drug therapy (antibiotics) bc of slow growth and dormancy
78Prevention of tuberculosis
BCG vaccine (best for young children, not really used in US)
79Etiological agent of Pneumococcal pneumonia
Streptococcus pneumoniae
80Pleural membranes inflammed (complication of various pneumonias)
Pleurisy
814 kins of bactrial pneumonias
-Pneumococcal (most common)
-H. influenzae
-Mycoplasmal
-Legionellosis
82Is streptococcus pneumoniae gram positive or gram negative?
Gram positive
83Signs ans symptoms of pneumococcal pneumonia
-High fever
-Breathing difficulty
-Chest pains
-Reddish lungs (dialated blood vessels)
-Sputum is rust colored
84Virulence factors of pneumococcal pneumonia
-Involves bronchi and alveoli
-Dense capsule (resistant to phagocytosis)
85Diagnosis and treatment of pneumococcal pneumonia
Agglutination test (recognizes capsule antigen)
Broad-spectrum antibiotic
86Prevention of pneumococcal pneumonia
2 vaccines:
-Covers 13 strains
-Covers all 23 strains
87Etiological of H. influenzae pneumonia
Haemophilus influenzae
88Is Haemophilus influenzae gram positive or negative?
Gram negative
89Signs and symptoms of H. influenzae
Resemble those of pneumococcal pneumonia
90Virulence factors of H. influenzae
-IgA proteases (cut off arms of IgAs)
-Antigenic variation of surface antigens
91Diagnosis of H. influenzae
-Gram stain of sputum (different from pneumococcal)
-Special media for nutritional requirements
92Prevention of H. influenzae
HiB vaccine (reduces by 99% in children)
93Etiological agent of mycoplasmal pneumonia
Mycoplasma pneumoniae
94Is mycoplasmal pneumonia also known as?
Walking pneumonia (or primary atypical pneumonia)
Less severe symptoms, lasts longer (common in college)
95Signs and symptoms of mycoplasmal pneumonia
-Mild but persistent respiratory symptoms (3+ weeks)
-Low-grade fever
-Cough
-Headache
96Virulence factors of mycoplasmal pneumonia
Community-Acquired Respiratory Distress Syndrome toxin (CARDS toxin)
97Diagnosis of mycoplasmal pneumonia
PCR test
Fried egg appearance of colonies on growth medium
98Treatment of mycoplasmal pneumonia
Tetracycline (doesn't elimitate it comepletely)
99Etiological agent of Legionellosis
Legionella pneumophila
100Is Legionella pneumophila gram positive or negative?
Gram negative
101What type of organism is legionella pneumophila in relaion to O2?
Aerobic
102Signs and symptoms of legionellosis
-High fever
-Cough
-General pneumonia symptoms
-Potenially fatal
103Virulence factors of legionellosis
Can replivate within macrophages
Forms biofilms
104Diagnosis of legionellosis
-Culture of selective media
-Serological tests
105Occurs as a complication of influenza, measles or chickenpox
Viral pneumonia
106How is viral pneumonia diagnosed?
It is suspected if no other cause is determined and mycoplasmal pneumonia is ruled out
107What has emerged as a causative agent of viral pneumonia
Corona viruses
108Types of viral pneumonia
-RSV
-Influenza (flu)
109Etiological agent of RSV
Respiratory Syncytial Virus
110Who is most affected by RSV?
Infants (most common, 1% need hospitalization)
Can be life threatening in older adults
111RSV immunity
Natural acquired immunity is poor (will likely get it more than once but not as bad)
112Signs and symptoms of RSV
-Pneumonia in infants
-Coughing and wheezing for more than a week
113Diagnosis of RSV
-Serological tests for viruses and antibodies
-Causes cell fusion (syncytium) in cell culture
114Etiological agent of influenza
Influenzavirus
115Viral structure of influenzavirus
-8 RNA segments
-Protein capsid
-Outer lipid envelope
116Signs and symptoms of influenzavirus
-Fever
-Chills
-Headache
-Muscle ache
-No intestinal symptoms (respiratory not stomach flu)
-less tahn 1% death
117Virulence factors of influenzavirus
Glycoproteins on the surface of the envelope are spikes:
-HA spikes
-NA spikes
118HA spikes
Hemagglutinin spikes
Recognize and attach to host cells
119NA spikes
Neuraminidase spikes
Help the virus separate from the enfected cell after resplication and infection
120How many serotypes of ther flu virus are there
4 - A,B,C,D
121How many serotypes of the flu virus can cause seasonal epidemics
2 - A,B
122How many serotypes of the flu virus can cause pandemics
1 - A
123What are the subtypes of Influenza A
A(H1N1)
A(H3N2)
124What are the lineages of Influenza B
B(Victoria)
B(Yamagata)
125What are two ways taht the flu virus evolves?
Antigenic drift
Antigenic shift
126What is antigenic drift caused by
Point mutation in genes encoding HA or NA spikes
127What does antigenic drift cause
Changes in the flu virus strain and seasonal epidemics
128What is antigenic shift caused by
Genetic recombination (or reassortment of RNS fragments) between different viral strains infecting the same cell
129What does antigenic shift cause
Changes in HA and NA spikes giving rise to major changes in the virus strain
Can lead to pandemics
130What kinds of flus can pigs can infected by
Avian (bird) flu
Swine flu
Human flu
131What happens when pigs are infected by multiple types of flu
One cell can be infected by two different flu viruses
Segmented RNA genome increases rates of genetic re-assortment
Leads to a completely new strain