Immuno Lab

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1
What are affinity and avidity?
measures of antibody binding strength, and are important characteristics of the immune response
2
what is affinity?
The strength of a single antibody-antigen interaction. ex: antibodies with high affinity bind more strongly and stably.
3
what is avidity?
the total strength of all interactions between an antibody and an antigen.
4
which is greater: affinity or avidity?
avidity is always greater than affinity.
5
What are factors that affect affinity and avidity?
# binding sites, structural arrangements
6
How many binding sites does IgE have?
2 binding sites
7
How many binding sites does IgM have?
10 binding sites
8
How many binding sites does IgG have?
2 binding sites
9
Out of all of the immunoglobulins, which one has high affinity?
IgG
10
which is the most common type of antibody used in molecular and cell biology?
IgG
11
What is Sensitivity? (associated with antibodies)
the test's ability to correctly identify those with antibodies (true positives)
12
What is Specificity? (associated with antibodies)
the test's ability to identify those without the antibodies (true negative)
13
A test has 50% sensitivity and 100% specificity. what does this mean?
the test correctly identified 25 out of 50 patient with the disease, and all 50 healthy people.
14
A test has 100% sensitivity and 50% specificity. what does this mean?
this means that the test correctly identified all 50 patients with the disease, but only 25 out of the 50 healthy people.
15
A test has 90% sensitivity and 80% specificity. What does this mean?
this means that 90% of people with the disease tested positive, and 80% of people without the disease tested negative.
16
when choosing a test, what is important to consider?
both sensitivity and specificity
17
A test with high specificity is good for?
Confirming a disease if a test result is positive, but it's still possible for people to get a negative test result when they actually have the disease.
18
What are the 6 different types of biohazardous waste and containers associated?
Sharpes
Biohazard
Trace Chemo
RCRA Hazard
Pharmaceutical
Radioactive
19
What are the 2 types of treponemal tests?
Direct Detection
and
Serological Tests
20
Direct Detection of Treponemal Tests detects?
Primary and secondary syphillius --diagnosed by presence of T. pallidum in exudates of skin lesions
21
What assays are under direct detection of treponemal test?
Dark-field microscopy and Fluorescent antibody testing
22
What is dark-field microscopy?
dark condensor - light need to do ASAP
23
What is fluorescent antibody testing?
flueorescent labeled Ab to conjugate to T. pallidum
24
When should serological tests be used for treponemal testing?
no active lesions, may be secondary or teritary syphillis - need to test for Abs.
25
What are the 2 serological tests for treponemal?
nontreponemal and treponemal
26
What does nontreponemal tests determine?
determine presence of Ab (reagin) that forms against cardiolipin, lipid material released in damaged cells.
27
What is flocculation?
specific types of precipitation that occurs over a narrow range of antigen concentrations.
28
What is Rapid Plasma Reagin (RPR) test? how does it work?
modified VDRL test involving agglutination; The cardiolipin -- containing antigen suspension is bound to charcoal particles. Check to titer.
29
What is the treponemal serological test? what should be used for confirmation?
Detects antibodies to T. pallidium or specific antigens; positive nontreponemal (screening) must be confirmed.
30
What are the 2 types of treponemal serological tests?
1. Fluorescent treponemal antibody absorption (FTA-ABS)
2. Agglutination tests
31
what does1. Fluorescent treponemal antibody absorption (FTA-ABS) use?
uses slide with green gluorescent labeled antibody - for positive result (shows Ab present)
32
What is an agglutination test for treponemal?
T. Pallidium Particle Agglutination (TP-PA)
33
What is T. Pallidium Particle Agglutination (TP-PA)?
colored gelatin particles to coated with trep antigens
34
What are the different types of hemagglutination testing?
Direct agglutination
Indirect (passive) agglutination
Reverse passive
Agglutination Inhibition
Hemagglutination Inhibition
35
What happens in direct agglutination?
occurs when antigens are found naturally on a particle
36
What does it mean when agglutination happens in direct agglutination?
indicates presence of patient antibody
37
What happens in indirect (passive) agglutination?
employs particles that are COATED with antigens not normally found on their surfaces
38
What does agglutination in indirect (passive) agglutination indicate?
indicates presence of patient antibody
39
What can indirect (passive) agglutination detect?
can detect antibodies to viruses
40
What happens in reverse passive testing?
antibdoy rather than antigen is attached to carrier particle. Particles coated with reagent antibody.
41
What does agglutination in reverse passive testing?
agglutination indicates presence of patient antibody.
42
What happens in agglutination inhibition testing?
haptens attached to carrier particles. Rxn based on inhibition of agglutination due to competition with a soluble antibody.
43
Lacking of agglutination in agglutination inhibition indicates what?
POSITIVE test - indicating presence of patient ANTIGEN
44
What happens in hemagglutination inhibition?
reaction uses same principle as agglutination inhibition except RBCs are indicator particles
45
Lacking of agglutination in hemagglutination inhibition indicates what?
POSITIVE test - indicating presence of patient ANTIBODY
46
What is the bloodborne pathogen exposure control plan? and what are the component?
written plan to provide necessary protection, free of charge.
Components to plan:
1. Engineering Controls - sharps disposal etc.
2. Work Practice Controls - standard precautions
3. Personal Protective Equipment
4. Medical - hep. B vaccine free of charge
5. Documentation - annual training
47
what is the human microbiome?
collection of microorganisms on the human body
48
what are the 3 diffferent types of symbiotic relationship between humans and bacteria?
1. Commensalistic
2. Mutualistic
3. Parasitic
49
What is a Commensalistic relationship?
no apparent benefit or harm to either
50
What is a Mutualistic relationship?
both humans and bacteria benefit from each other
51
What is a Parasitic relationship?
bacteria result in harm to the host
52
What is the hosts protective mechanism against bacteria?
Immune Defense Mechanisms
1. first line of defense against pathogens - skin and mucosal surface
2. Skin has enzymes and antimicrobial defense peptides
3. Acute phase reactants like CRP - activates complement and promotes phagocytosis
4. Adaptive immune response produces antibodies against bacterial antigens and exotoxins.
53
what is an alternative to disinfect work station/desk in the absence of disinfectant spray?
Sodium hypochlorite (household bleach) 1:10 dilution
54
What are the 3 different zones of a precipitation curve?
Prozone, zone of equivalence, and postzone
55
What is the Prozone?
excess of antibody, suboptimal ppt. too many Abs for lattice formation
56
What is the zone of equivalence?
optimal ratio of antibody to antigen, results in optimal ppt.
57
What is the postzone?
excess of antigen, suboptimal ppt.
58
What is the difference between precipitation and agglutination?
PPT involves SOLUBLE antigens, while
agglutination involves PARTICULATE antigens
59
What is preciptiation?
formation of visible solid ppt when soluble antigens bind to their specific antibodies
60
What is agglutination?
clumping together of particulate antigens (like cells) due to binding with specific antibodies, essentially creating clumps instead of ppt.
61
What enzymes are used to detect H.Pylori infections?
UREASE
62
Which genes have a higher risk of devloping gastri/peptic or gastric carcinoma?
Produces protein CagA and a vacuolating cytotoxin, or VacA
63
What is UREASE?
Enzyme that provides a buffer zone around the bacteria that protects it from the effects of stomach acid.
64
What tests are used to detect H.Pylori infections?
Detect urease from stomach biopsy
CLO detects urease activity in gastric mucosal biopsies - gell turns HOT pink due to increase in pH
Urea Breath Test
65
What is the difference between endo and exotoxins?
Endotoxin (lipid A) is found in the LPS layer of cell wall of gram
Exotoxin are protein moleucles released from the living bacteria
66
What is another name for endotoxin?
lipid A
67
What is an endotoxin?
a toxin found in the LPS (lipopolysaccharide) layer of cell wall of gram - bacteria.
When cell dies - it releases the Lipid A in host
Causes host response to release cytokines, TNF, and platelet activating factor.
68
What is an exotoxin?
specific and targeted activity.
Protein molecules released from living bacteria (mostly gram + bacteria) and considered most potent molecules known to harm living moleulces.
Neurotoxins, cytotoxins, enterotoxins
Exotoxins bind to specific receptors on host cells that activate specific activity of a toxin.
69
What are the 3 different types of red plastic biohazard containers?
1. sharps
2. biohazards
3. pathological
70
What do sharp container contain?
piercing skin biohazard waste
71
What do biohazard containers contain?
anything contaminated with blood or biohazard material
72
what do patholgical containers contain?
tissues organs, fluids, and body parts
73
What is specificity?
proportion of people who DO NOT have the disease and who have a negative test
74
What is the formula for sensitivity?
True positives / (true positives + false negatives)
75
What is the formula for specificity?
True negatives / (true negatives + false positives)
76
What chart is this?
Levey-Jennings Charts
77
How are the control limits calculated for a Levey-Jennings Chart?
uses the calculated standard deviation (or known SD)
78
What is California's Laboratory Regulatory body?
California dept of health, Laboratory Field Service (STATE LEVEL)
79
What make serological for H.pylori so difficult?
May remain positive for years, which decreases the specifity of these tests confirming active or eradicated infection.
80
What is Group A Streptococci (GAS)?
One of the most common pathogenic bacteria and causes a variety of diseases
81
what is M-protein?
the major virulence factor of GAS has a net negative charge at the amino-terminal end that helps inhibit phagocytosis
-limits deposition of C3 on the bacterial surface, diminishing complement.
82
What test/assay are sandwich phenomenon seen in?
Capture assay
83
What is the Capture Assay?
1. Sandwich immunoassay
2. Ab (rather than ag) is bound to the solid phase during incubation
3. Enzyme labeled Ab added and attaches to available patient Ab
4. Sandwich is formed
5. Enzyme activity directly proportional to amount of Ab.
84
How do you diagnose syphillus and what test?
Nontreponemal tests first (RPR) or VDRL first (screening test)
if positive nontrep test then Treponemal tests
85
What does treponemal tests detect?
Ab against T. pallidium or antigens
86
What are the 2 types of treponemal tests?
1. Fluorescent treponemal antibody absorption (FTA-ABS)
2. Agglutination Tests (TP-PA)
87
What do you do when there's an intermediate result in western blot testing?
HIV screening tests are known to have false positives. Specimens with some bands, but do not meet criteria. REPEAT WB AGAIN; IF STILL INDETERMINATE THEN REPEAT WB AGAIN IN ABOUT 4-6 WEEKS USING A NEW SPECIMEN
88
What is western blot used for? example.
confirmatory test for a positive HIV Ab screen test (ELISA)
89
What does a HIV Ab screening test (ELISA) utilize?
Utilizes nitrocellulose or nylon strips contrining individaul HIV proteins that separate gel electrophoeses and blotted onto test.
90
what happens when the screening test is positive for HIV? (specific)
antibodies move across strip.
91
what is affinity?
the strength of a single bond or interaction between two molecules at a specific binding site.
92
what is avidity?
the total strenght of all non-covalent interactions between 2 species that interact multivalently . Avidity takes into account multiple binding sites or interactions.
93
What type of antibodies have high affinity and low avidity?
antibodies with fewer binding sites have high affinity and low avidity.
94
What is hemagglutination?
agglutination reactions involving RBCs
95
What is ABO blood typing?
patient RBCs are mixed with antisera of IgM type can be used to determine the presence of absence of the A and B antigens.
96
what are examples of cassette assay (immunochromatography)
rapid covid, and pregnancy test
97
What are the steps in immunochromatographic assay?
1. Patient sample is added to a cassette containing antibody labeled with colodial gold.
2. Sample combines with antibody and is moved along by capillary flow.
3. Monoclonal antibody to the analyte captures the patient antigen attached to gold-labeled antibody.
4. Control line has antibody tha captures collodial gold-labeled antibody
98
what type of Ab is rheumatoid factor?
IgM
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